RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W SPO71Q03868 1245 aa5.87□□□□□ -1.47
VID30YGL227W DUS4Q06063 367 aa5.87□□□□□ -1.47
VID30YGL227W YLR422WQ06409 1932 aa5.87□□□□□ -1.47
VID30YGL227W NSG2P53898 299 aa5.86□□□□□ -1.47
VID30YGL227W SVL3Q03088 825 aaKnown RBP5.86□□□□□ -1.47
VID30YGL227W RPN7Q06103 429 aaKnown RBP5.86□□□□□ -1.47
VID30YGL227W YLR326WQ06170 240 aaKnown RBP5.86□□□□□ -1.47
VID30YGL227W FLC1Q08967 793 aa5.86□□□□□ -1.47
VID30YGL227W CBP3P21560 335 aa5.86□□□□□ -1.47
VID30YGL227W RNR3P21672 869 aaKnown RBP5.86□□□□□ -1.47
VID30YGL227W KIN82P25341 720 aa5.86□□□□□ -1.47
VID30YGL227W PBY1P38254 753 aa5.86□□□□□ -1.47
VID30YGL227W FAA3P39002 694 aa5.86□□□□□ -1.47
VID30YGL227W YEL023CP39992 682 aa5.86□□□□□ -1.47
VID30YGL227W HUL5P53119 910 aa5.86□□□□□ -1.47
VID30YGL227W TMA64Q04600 565 aaKnown RBP5.86□□□□□ -1.47
VID30YGL227W CKA2P19454 339 aa5.85□□□□□ -1.47
VID30YGL227W MET4P32389 672 aa5.85□□□□□ -1.47
VID30YGL227W RFC1P38630 861 aaKnown RBP5.85□□□□□ -1.47
VID30YGL227W OPT1P40897 799 aa5.85□□□□□ -1.47
VID30YGL227W FAA4P47912 694 aaKnown RBP5.85□□□□□ -1.47
VID30YGL227W ATH1P48016 1211 aa5.85□□□□□ -1.47
VID30YGL227W RPT6Q01939 405 aaKnown RBP5.85□□□□□ -1.47
VID30YGL227W YLR455WQ06188 304 aa5.85□□□□□ -1.47
VID30YGL227W LAP2Q10740 671 aa5.85□□□□□ -1.47
VID30YGL227W YDR034W-BQ6Q5X2 51 aa5.85□□□□□ -1.47
VID30YGL227W HMG2P12684 1045 aa5.85□□□□□ -1.47
VID30YGL227W MBR1P23493 339 aa5.85□□□□□ -1.47
VID30YGL227W PMC1P38929 1173 aaPredicted RBP5.85□□□□□ -1.47
VID30YGL227W DSE3Q08729 430 aa5.85□□□□□ -1.47
VID30YGL227W ANP1P32629 500 aa5.85□□□□□ -1.47
VID30YGL227W AZR1P50080 613 aa5.85□□□□□ -1.47
VID30YGL227W SEC5P89102 971 aa5.85□□□□□ -1.47
VID30YGL227W RPL22AP05749 121 aaKnown RBP5.84□□□□□ -1.47
VID30YGL227W YUR1P26725 428 aa5.84□□□□□ -1.47
VID30YGL227W CYS3P31373 394 aaKnown RBP5.84□□□□□ -1.47
VID30YGL227W RXT2P38255 430 aa5.84□□□□□ -1.47
VID30YGL227W SLN1P39928 1220 aaPredicted RBP5.84□□□□□ -1.47
VID30YGL227W VID27P40157 782 aa5.84□□□□□ -1.47
VID30YGL227W RTS3P53289 263 aa5.84□□□□□ -1.47
VID30YGL227W ZPR1P53303 486 aaKnown RBP5.84□□□□□ -1.47
VID30YGL227W NAF1P53919 492 aaKnown RBP5.84□□□□□ -1.47
VID30YGL227W GRX3Q03835 250 aa5.84□□□□□ -1.47
VID30YGL227W VPS35P34110 944 aa5.84□□□□□ -1.48
VID30YGL227W ALO1P54783 526 aaKnown RBP5.84□□□□□ -1.48
VID30YGL227W MFM1Q02783 413 aa5.84□□□□□ -1.48
VID30YGL227W PIG1Q06216 648 aa5.84□□□□□ -1.48
VID30YGL227W CIR2Q08822 631 aa5.84□□□□□ -1.48
VID30YGL227W RPT1P33299 467 aaKnown RBP5.83□□□□□ -1.48
VID30YGL227W KTR3P38130 404 aaPredicted RBP5.83□□□□□ -1.48
VID30YGL227W APN2P38207 520 aa5.83□□□□□ -1.48
VID30YGL227W VPS8P39702 1274 aa5.83□□□□□ -1.48
VID30YGL227W YFL052WP43551 465 aa5.83□□□□□ -1.48
VID30YGL227W MAK31P23059 88 aa5.83□□□□□ -1.48
VID30YGL227W MCM3P24279 971 aaKnown RBP5.83□□□□□ -1.48
VID30YGL227W BMH2P34730 273 aaKnown RBP5.83□□□□□ -1.48
VID30YGL227W SPO1P53541 631 aa5.83□□□□□ -1.48
VID30YGL227W RET3P53600 189 aa5.83□□□□□ -1.48
VID30YGL227W YMR321CQ04898 105 aa5.83□□□□□ -1.48
VID30YGL227W COQ1P18900 473 aa5.82□□□□□ -1.48
VID30YGL227W SPT5P27692 1063 aaKnown RBP5.82□□□□□ -1.48
VID30YGL227W PGM1P33401 570 aaKnown RBP5.82□□□□□ -1.48
VID30YGL227W UBP9P39967 754 aa5.82□□□□□ -1.48
VID30YGL227W RRP15Q06511 250 aaPredicted RBP5.82□□□□□ -1.48
VID30YGL227W RVB2Q12464 471 aaKnown RBP5.82□□□□□ -1.48
VID30YGL227W RRP8P38961 392 aaKnown RBP5.82□□□□□ -1.48
VID30YGL227W PWP2P25635 923 aaKnown RBP5.81□□□□□ -1.48
VID30YGL227W LEE1Q02799 301 aaKnown RBP5.81□□□□□ -1.48
VID30YGL227W HCR1Q05775 265 aaKnown RBP5.81□□□□□ -1.48
VID30YGL227W PCD1Q12524 340 aa5.81□□□□□ -1.48
VID30YGL227W SRP54P20424 541 aaKnown RBP5.81□□□□□ -1.48
VID30YGL227W FMO1P38866 432 aa5.81□□□□□ -1.48
VID30YGL227W PEX29Q03370 554 aa5.81□□□□□ -1.48
VID30YGL227W MRD1Q06106 887 aaKnown RBP5.81□□□□□ -1.48
VID30YGL227W SRP40P32583 406 aaPredicted RBP5.81□□□□□ -1.48
VID30YGL227W SFB3P38810 929 aa5.81□□□□□ -1.48
VID30YGL227W NUP82P40368 713 aa5.81□□□□□ -1.48
VID30YGL227W ESL1P40456 1118 aa5.81□□□□□ -1.48
VID30YGL227W CLP1Q08685 445 aaPredicted RBP5.81□□□□□ -1.48
VID30YGL227W MPD2Q99316 277 aa5.81□□□□□ -1.48
VID30YGL227W HXK1P04806 485 aaKnown RBP5.8□□□□□ -1.48
VID30YGL227W HAP2P06774 265 aa5.8□□□□□ -1.48
VID30YGL227W MAK11P20484 414 aaKnown RBP5.8□□□□□ -1.48
VID30YGL227W RPL8BP29453 256 aaKnown RBP5.8□□□□□ -1.48
VID30YGL227W RGD1P38339 666 aa5.8□□□□□ -1.48
VID30YGL227W YIR042CP40586 236 aa5.8□□□□□ -1.48
VID30YGL227W YPR084WQ06821 456 aa5.8□□□□□ -1.48
VID30YGL227W PSK2Q08217 1101 aa5.8□□□□□ -1.48
VID30YGL227W RPA135P22138 1203 aaKnown RBP5.8□□□□□ -1.48
VID30YGL227W RAM2P29703 316 aa5.8□□□□□ -1.48
VID30YGL227W FPR3P38911 411 aaKnown RBP5.8□□□□□ -1.48
VID30YGL227W TUB4P53378 473 aa5.8□□□□□ -1.48
VID30YGL227W NOP13P53883 403 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
VID30YGL227W ROD1Q02805 837 aa5.8□□□□□ -1.48
VID30YGL227W VPS30Q02948 557 aa5.8□□□□□ -1.48
VID30YGL227W MOB1P40484 314 aa5.79□□□□□ -1.48
VID30YGL227W HXT10P43581 546 aa5.79□□□□□ -1.48
VID30YGL227W PSP1P50896 841 aaKnown RBP5.79□□□□□ -1.48
VID30YGL227W MNL2Q12205 849 aa5.79□□□□□ -1.48
VID30YGL227W MAK16P10962 306 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms