RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	ADY4	Q05955	493 aa		13.18	□□□□□ -0.3
SCC4	YER147C	OSH2	Q12451	1283 aa		13.18	□□□□□ -0.3
SCC4	YER147C	RAD57	P25301	460 aa		13.17	□□□□□ -0.3
SCC4	YER147C	SRB4	P32569	687 aa		13.17	□□□□□ -0.3
SCC4	YER147C	CIT3	P43635	486 aa		13.17	□□□□□ -0.3
SCC4	YER147C	ASE1	P50275	885 aa		13.17	□□□□□ -0.3
SCC4	YER147C	PRE8	P23639	250 aa		13.16	□□□□□ -0.3
SCC4	YER147C	CHS3	P29465	1165 aa		13.16	□□□□□ -0.3
SCC4	YER147C	BYE1	P36106	594 aa		13.16	□□□□□ -0.3
SCC4	YER147C	PES4	P39684	611 aa		13.16	□□□□□ -0.3
SCC4	YER147C	MRS2	Q01926	470 aa		13.16	□□□□□ -0.3
SCC4	YER147C	SPO75	Q07798	868 aa		13.16	□□□□□ -0.3
SCC4	YER147C	YPL216W	Q08964	1102 aa		13.16	□□□□□ -0.3
SCC4	YER147C	PPR1	P07272	904 aa	Predicted RBP	13.16	□□□□□ -0.3
SCC4	YER147C	CKA2	P19454	339 aa		13.16	□□□□□ -0.3
SCC4	YER147C	SRM1	P21827	482 aa		13.16	□□□□□ -0.3
SCC4	YER147C	PDC6	P26263	563 aa	Known RBP	13.16	□□□□□ -0.3
SCC4	YER147C	RPS7A	P26786	190 aa	Known RBP	13.16	□□□□□ -0.3
SCC4	YER147C	DEP1	P31385	405 aa		13.16	□□□□□ -0.3
SCC4	YER147C	GLN1	P32288	370 aa	Known RBP	13.16	□□□□□ -0.3
SCC4	YER147C	SMF1	P38925	575 aa		13.16	□□□□□ -0.3
SCC4	YER147C	ACK1	Q07622	623 aa	Predicted RBP	13.16	□□□□□ -0.3
SCC4	YER147C	GAS5	Q08193	484 aa		13.16	□□□□□ -0.3
SCC4	YER147C	VPS41	P38959	992 aa		13.15	□□□□□ -0.3
SCC4	YER147C	CBK1	P53894	756 aa		13.15	□□□□□ -0.3
SCC4	YER147C	GYL1	Q04322	720 aa		13.15	□□□□□ -0.3
SCC4	YER147C	SKG3	Q06315	1026 aa		13.15	□□□□□ -0.3
SCC4	YER147C	PLP2	Q12017	286 aa		13.15	□□□□□ -0.3
SCC4	YER147C	GRX6	Q12438	231 aa		13.15	□□□□□ -0.3
SCC4	YER147C	ISY1	P21374	235 aa	Predicted RBP	13.14	□□□□□ -0.31
SCC4	YER147C	UGA2	P38067	497 aa		13.14	□□□□□ -0.31
SCC4	YER147C	TOM70	P07213	617 aa	Known RBP	13.14	□□□□□ -0.31
SCC4	YER147C	IES1	P43579	692 aa		13.14	□□□□□ -0.31
SCC4	YER147C	NGL3	Q03210	505 aa		13.14	□□□□□ -0.31
SCC4	YER147C	CKI1	P20485	582 aa		13.13	□□□□□ -0.31
SCC4	YER147C	YGR130C	P53278	816 aa		13.13	□□□□□ -0.31
SCC4	YER147C	VIP1	Q06685	1146 aa	Known RBP	13.13	□□□□□ -0.31
SCC4	YER147C	PCL8	Q08966	492 aa		13.13	□□□□□ -0.31
SCC4	YER147C	RPC53	P25441	422 aa		13.12	□□□□□ -0.31
SCC4	YER147C	YKU70	P32807	602 aa		13.12	□□□□□ -0.31
SCC4	YER147C	MUD2	P36084	527 aa	Known RBP	13.12	□□□□□ -0.31
SCC4	YER147C	GTT3	P39996	337 aa		13.12	□□□□□ -0.31
SCC4	YER147C	OPY2	Q06810	360 aa		13.12	□□□□□ -0.31
SCC4	YER147C	CLB1	P24868	471 aa		13.12	□□□□□ -0.31
SCC4	YER147C	CNS1	P33313	385 aa		13.12	□□□□□ -0.31
SCC4	YER147C	SMC2	P38989	1170 aa	Known RBP	13.12	□□□□□ -0.31
SCC4	YER147C	HUL4	P40985	892 aa		13.12	□□□□□ -0.31
SCC4	YER147C	SOV1	Q04748	898 aa		13.12	□□□□□ -0.31
SCC4	YER147C	YLR001C	Q07895	862 aa		13.12	□□□□□ -0.31
SCC4	YER147C	SMC6	Q12749	1114 aa		13.12	□□□□□ -0.31
SCC4	YER147C	YEL076C-A	P0CX16	216 aa		13.11	□□□□□ -0.31
SCC4	YER147C	YLR464W	P0CX17	216 aa		13.11	□□□□□ -0.31
SCC4	YER147C	VPS45	P38932	577 aa		13.11	□□□□□ -0.31
SCC4	YER147C	YEL076C	P39971	216 aa		13.11	□□□□□ -0.31
SCC4	YER147C	CTK3	P46963	296 aa	Predicted RBP	13.11	□□□□□ -0.31
SCC4	YER147C	RPL8A	P17076	256 aa	Known RBP	13.1	□□□□□ -0.31
SCC4	YER147C	GSY1	P23337	708 aa		13.1	□□□□□ -0.31
SCC4	YER147C	SEC20	P28791	383 aa		13.1	□□□□□ -0.31
SCC4	YER147C	NFU1	P32860	256 aa		13.1	□□□□□ -0.31
SCC4	YER147C	ERT1	P38140	529 aa		13.1	□□□□□ -0.31
SCC4	YER147C	TOP1	P04786	769 aa		13.1	□□□□□ -0.31
SCC4	YER147C	HXT1	P32465	570 aa		13.1	□□□□□ -0.31
SCC4	YER147C	YBL086C	P38177	466 aa		13.1	□□□□□ -0.31
SCC4	YER147C	ORC6	P38826	435 aa		13.1	□□□□□ -0.31
SCC4	YER147C	CCM1	P48237	864 aa	Predicted RBP	13.1	□□□□□ -0.31
SCC4	YER147C	YLH47	Q06493	454 aa		13.1	□□□□□ -0.31
SCC4	YER147C	SSB1	P11484	613 aa	Known RBP	13.09	□□□□□ -0.31
SCC4	YER147C	SRO9	P25567	434 aa	Known RBP	13.09	□□□□□ -0.31
SCC4	YER147C	PAP1	P29468	568 aa	Known RBP	13.09	□□□□□ -0.31
SCC4	YER147C	CLB5	P30283	435 aa		13.09	□□□□□ -0.31
SCC4	YER147C	SSB2	P40150	613 aa	Known RBP	13.09	□□□□□ -0.31
SCC4	YER147C	TOS3	P43637	560 aa		13.09	□□□□□ -0.31
SCC4	YER147C	YGL140C	P53120	1219 aa		13.09	□□□□□ -0.31
SCC4	YER147C	AIM33	Q04516	312 aa		13.09	□□□□□ -0.31
SCC4	YER147C	RRG1	Q12167	365 aa	Predicted RBP	13.09	□□□□□ -0.31
SCC4	YER147C	RMP1	Q12530	201 aa		13.09	□□□□□ -0.31
SCC4	YER147C	TUS1	Q06412	1307 aa		13.09	□□□□□ -0.31
SCC4	YER147C	FLO11	P08640	1367 aa		13.08	□□□□□ -0.31
SCC4	YER147C	MAK16	P10962	306 aa	Predicted RBP	13.08	□□□□□ -0.32
SCC4	YER147C	EMP47	P43555	445 aa		13.08	□□□□□ -0.32
SCC4	YER147C	MIC19	P43594	170 aa		13.08	□□□□□ -0.32
SCC4	YER147C	RNT1	Q02555	471 aa		13.08	□□□□□ -0.32
SCC4	YER147C	BUL2	Q03758	920 aa	Known RBP	13.08	□□□□□ -0.32
SCC4	YER147C	NOP6	Q07623	225 aa	Known RBP	13.08	□□□□□ -0.32
SCC4	YER147C	NUR1	Q12066	484 aa		13.08	□□□□□ -0.32
SCC4	YER147C	CDC60	P26637	1090 aa	Known RBP	13.08	□□□□□ -0.32
SCC4	YER147C	GAA1	P39012	614 aa		13.08	□□□□□ -0.32
SCC4	YER147C	MSN5	P52918	1224 aa		13.08	□□□□□ -0.32
SCC4	YER147C	OMS1	Q06668	471 aa		13.08	□□□□□ -0.32
SCC4	YER147C	DAS2	Q12084	232 aa		13.08	□□□□□ -0.32
SCC4	YER147C	APL1	P27351	700 aa		13.07	□□□□□ -0.32
SCC4	YER147C	YKL222C	P35995	705 aa		13.07	□□□□□ -0.32
SCC4	YER147C	PPS1	P38148	807 aa		13.07	□□□□□ -0.32
SCC4	YER147C	SAP1	P39955	897 aa	Known RBP	13.07	□□□□□ -0.32
SCC4	YER147C	UBP9	P39967	754 aa		13.07	□□□□□ -0.32
SCC4	YER147C	ROG3	P43602	733 aa		13.07	□□□□□ -0.32
SCC4	YER147C	YGR273C	P53329	174 aa		13.07	□□□□□ -0.32
SCC4	YER147C	POB3	Q04636	552 aa	Known RBP	13.07	□□□□□ -0.32
SCC4	YER147C	YDL124W	Q07551	312 aa	Known RBP	13.07	□□□□□ -0.32
SCC4	YER147C	TUP1	P16649	713 aa		13.06	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms