RNA–Protein interactions for RNA: YDR532C

KRE28, Transcript of Subunit of a kinetochore-microtubule binding complex, yeastyeast

Gene KRE28, Length 1,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE28YDR532C PRP6P19735 899 aaPredicted RBP6.74□□□□□ -1.33
KRE28YDR532C GTS1P40956 396 aa6.74□□□□□ -1.33
KRE28YDR532C TAF1P46677 1066 aa6.74□□□□□ -1.33
KRE28YDR532C YAR028WP39548 234 aa6.73□□□□□ -1.33
KRE28YDR532C NOG1Q02892 647 aaKnown RBP6.73□□□□□ -1.33
KRE28YDR532C YCS4Q06156 1176 aa6.73□□□□□ -1.33
KRE28YDR532C CHC1P22137 1653 aaKnown RBP6.73□□□□□ -1.33
KRE28YDR532C CIC1P38779 376 aaKnown RBP6.72□□□□□ -1.33
KRE28YDR532C MTR4P47047 1073 aaKnown RBP6.72□□□□□ -1.33
KRE28YDR532C YDL177CQ12257 170 aa6.72□□□□□ -1.33
KRE28YDR532C GIP4P39732 760 aa6.71□□□□□ -1.34
KRE28YDR532C MRPL22P53881 309 aa6.71□□□□□ -1.34
KRE28YDR532C YLR257WQ06146 321 aaKnown RBP6.71□□□□□ -1.34
KRE28YDR532C RET1P22276 1149 aaKnown RBP6.7□□□□□ -1.34
KRE28YDR532C AIM3P38266 947 aaKnown RBP6.7□□□□□ -1.34
KRE28YDR532C HAT1Q12341 374 aa6.7□□□□□ -1.34
KRE28YDR532C SAM35P14693 329 aa6.69□□□□□ -1.34
KRE28YDR532C YHL012WP38709 493 aa6.69□□□□□ -1.34
KRE28YDR532C UTP5Q04177 643 aaKnown RBP6.69□□□□□ -1.34
KRE28YDR532C MSH3P25336 1018 aa6.68□□□□□ -1.34
KRE28YDR532C FLR1P38124 548 aa6.68□□□□□ -1.34
KRE28YDR532C ETP1P38748 585 aaKnown RBP6.68□□□□□ -1.34
KRE28YDR532C HSE1P38753 452 aa6.68□□□□□ -1.34
KRE28YDR532C NMD3P38861 518 aaKnown RBP6.68□□□□□ -1.34
KRE28YDR532C GEF1P37020 779 aa6.67□□□□□ -1.34
KRE28YDR532C XKS1P42826 600 aa6.67□□□□□ -1.34
KRE28YDR532C RIM8P53179 542 aa6.67□□□□□ -1.34
KRE28YDR532C TAF7Q05021 590 aa6.67□□□□□ -1.34
KRE28YDR532C RSA3Q05942 220 aaKnown RBP6.67□□□□□ -1.34
KRE28YDR532C HRK1Q08732 759 aaKnown RBP6.67□□□□□ -1.34
KRE28YDR532C MDL2P33311 773 aa6.66□□□□□ -1.34
KRE28YDR532C LAP2Q10740 671 aa6.66□□□□□ -1.34
KRE28YDR532C DNF3Q12674 1656 aa6.65□□□□□ -1.34
KRE28YDR532C PRP40P33203 583 aaKnown RBP6.65□□□□□ -1.34
KRE28YDR532C PEX13P80667 386 aa6.65□□□□□ -1.34
KRE28YDR532C VMA4P22203 233 aaKnown RBP6.64□□□□□ -1.35
KRE28YDR532C FOL2P51601 243 aaKnown RBP6.64□□□□□ -1.35
KRE28YDR532C ARO1P08566 1588 aaKnown RBP6.64□□□□□ -1.35
KRE28YDR532C SOD2P00447 233 aa6.63□□□□□ -1.35
KRE28YDR532C UGA4P32837 571 aa6.63□□□□□ -1.35
KRE28YDR532C RSM26P47141 266 aa6.63□□□□□ -1.35
KRE28YDR532C HDA2Q06629 674 aa6.63□□□□□ -1.35
KRE28YDR532C KAR2P16474 682 aaKnown RBP6.62□□□□□ -1.35
KRE28YDR532C SRO9P25567 434 aaKnown RBP6.62□□□□□ -1.35
KRE28YDR532C VPS35P34110 944 aa6.62□□□□□ -1.35
KRE28YDR532C ATG14P38270 344 aa6.62□□□□□ -1.35
KRE28YDR532C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
KRE28YDR532C GCD6P32501 712 aaKnown RBP6.61□□□□□ -1.35
KRE28YDR532C YHL050CP38721 697 aa6.61□□□□□ -1.35
KRE28YDR532C YHR219WP38900 624 aa6.61□□□□□ -1.35
KRE28YDR532C YJL045WP47052 634 aa6.61□□□□□ -1.35
KRE28YDR532C YNR063WP53749 607 aa6.61□□□□□ -1.35
KRE28YDR532C ULP1Q02724 621 aa6.61□□□□□ -1.35
KRE28YDR532C YBT1P32386 1661 aa6.61□□□□□ -1.35
KRE28YDR532C PHO4P07270 312 aaKnown RBP6.6□□□□□ -1.35
KRE28YDR532C AIM26P32858 118 aa6.6□□□□□ -1.35
KRE28YDR532C SQT1P35184 431 aa6.6□□□□□ -1.35
KRE28YDR532C QNS1P38795 714 aaKnown RBP6.6□□□□□ -1.35
KRE28YDR532C SNO2P53823 222 aa6.6□□□□□ -1.35
KRE28YDR532C DAL4Q04895 635 aa6.6□□□□□ -1.35
KRE28YDR532C YPL277CQ08989 487 aa6.6□□□□□ -1.35
KRE28YDR532C CAT8P39113 1433 aa6.59□□□□□ -1.35
KRE28YDR532C TOD6P34219 525 aa6.59□□□□□ -1.35
KRE28YDR532C PEX28P38848 579 aa6.59□□□□□ -1.35
KRE28YDR532C RKM2Q03942 479 aa6.59□□□□□ -1.35
KRE28YDR532C RPS13P05756 151 aaKnown RBP6.58□□□□□ -1.36
KRE28YDR532C RDH54P38086 958 aa6.58□□□□□ -1.36
KRE28YDR532C GEA1P47102 1408 aaPredicted RBP6.58□□□□□ -1.36
KRE28YDR532C VPS53P47061 822 aa6.57□□□□□ -1.36
KRE28YDR532C YSC84P32793 468 aa6.56□□□□□ -1.36
KRE28YDR532C ADD66P36040 267 aa6.56□□□□□ -1.36
KRE28YDR532C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36 RIP-Chip
KRE28YDR532C RSC58Q07979 502 aa6.56□□□□□ -1.36
KRE28YDR532C BNR1P40450 1375 aa6.56□□□□□ -1.36
KRE28YDR532C DAK2P43550 591 aa6.55□□□□□ -1.36
KRE28YDR532C YGL140CP53120 1219 aa6.55□□□□□ -1.36
KRE28YDR532C MET4P32389 672 aa6.54□□□□□ -1.36
KRE28YDR532C ENV11P53246 860 aa6.54□□□□□ -1.36
KRE28YDR532C TOS4Q06266 489 aa6.54□□□□□ -1.36
KRE28YDR532C NBA1Q08229 501 aaKnown RBP6.54□□□□□ -1.36
KRE28YDR532C SEC7P11075 2009 aaKnown RBP6.54□□□□□ -1.36
KRE28YDR532C SPS1P08458 490 aa6.53□□□□□ -1.36
KRE28YDR532C HEM13P11353 328 aaKnown RBP6.53□□□□□ -1.36
KRE28YDR532C PPX1P38698 397 aa6.53□□□□□ -1.36
KRE28YDR532C YAP3P38749 330 aa6.53□□□□□ -1.36
KRE28YDR532C YPL109CQ02981 657 aa6.53□□□□□ -1.36
KRE28YDR532C ADI1Q03677 179 aa6.53□□□□□ -1.36
KRE28YDR532C OXR1Q08952 273 aa6.53□□□□□ -1.36
KRE28YDR532C TY3B-GQ99315 1547 aa6.53□□□□□ -1.36
KRE28YDR532C USO1P25386 1790 aa6.52□□□□□ -1.37
KRE28YDR532C SEC23P15303 768 aaKnown RBP6.52□□□□□ -1.37
KRE28YDR532C COQ4O13525 335 aa6.51□□□□□ -1.37
KRE28YDR532C SSF1P38789 453 aaPredicted RBP6.51□□□□□ -1.37
KRE28YDR532C CLU1Q03690 1277 aaKnown RBP6.51□□□□□ -1.37
KRE28YDR532C EST2Q06163 884 aa6.51□□□□□ -1.37
KRE28YDR532C RCL1Q08096 367 aaPredicted RBP6.51□□□□□ -1.37
KRE28YDR532C YLR358CO13565 187 aa6.5□□□□□ -1.37
KRE28YDR532C PRE10P21242 288 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
KRE28YDR532C KIP1P28742 1111 aa6.5□□□□□ -1.37
KRE28YDR532C AFG2P32794 780 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 148.4 ms