RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	PUP3	P25451	205 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	SSE1	P32589	693 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	HSM3	P38348	480 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	BZZ1	P38822	633 aa		4.13	□□□□□ -1.75
RPO21	YDL140C	TSR3	Q12094	313 aa	Known RBP	4.13	□□□□□ -1.75
RPO21	YDL140C	RPO41	P13433	1351 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	CYB2	P00175	591 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	TFA2	P36145	328 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	REI1	P38344	393 aa	Predicted RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	FAU1	P40099	211 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	CCE1	Q03702	353 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	RGA2	Q06407	1009 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	CNS1	P33313	385 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	FTR1	P40088	404 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	NAN1	Q02931	896 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	RPN9	Q04062	393 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	TIF35	Q04067	274 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	ATG9	Q12142	997 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	REC8	Q12188	680 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	PAT1	P25644	796 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	PTK1	P36002	662 aa	Predicted RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	XDJ1	P39102	459 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	ESL1	P40456	1118 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	VPS4	P52917	437 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	RNA1	P11745	407 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	KRS1	P15180	591 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	PGM1	P33401	570 aa	Known RBP	4.12	□□□□□ -1.75
RPO21	YDL140C	KDX1	P36005	433 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	MTC5	Q03897	1148 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	YDR056C	Q12025	205 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	NUP145	P49687	1317 aa		4.12	□□□□□ -1.75
RPO21	YDL140C	LAT1	P12695	482 aa	Known RBP	4.11	□□□□□ -1.75
RPO21	YDL140C	DAL7	P21826	554 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	MRPL32	P25348	183 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	NPL4	P33755	580 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	MRPL7	P36519	292 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPO21	YDL140C	RKM2	Q03942	479 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	YLR271W	Q06152	274 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	BIK1	P11709	440 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	CLB2	P24869	491 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	RRM3	P38766	723 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	VPS9	P54787	451 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	UTP14	Q04500	899 aa	Known RBP	4.11	□□□□□ -1.75
RPO21	YDL140C	THI3	Q07471	609 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	RPA190	P10964	1664 aa	Known RBP	4.11	□□□□□ -1.75
RPO21	YDL140C	AI4	P03878	556 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	YEL043W	P32618	956 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	IXR1	P33417	597 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	GEM1	P39722	662 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPO21	YDL140C	HMI1	Q12039	706 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	RDS1	P25611	832 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	CWH43	P25618	953 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	IMG2	P25642	146 aa	Predicted RBP	4.11	□□□□□ -1.75
RPO21	YDL140C	GCD6	P32501	712 aa	Known RBP	4.11	□□□□□ -1.75
RPO21	YDL140C	EST2	Q06163	884 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	YLL067C	Q07888	1374 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	YOL057W	Q08225	711 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	PPM2	Q08282	695 aa		4.11	□□□□□ -1.75
RPO21	YDL140C	MRPL25	P23369	157 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	RRP3	P38712	501 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	YNL260C	P53846	198 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	IRC4	Q03036	179 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	YLR455W	Q06188	304 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	TYW1	Q08960	810 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	CHO2	P05374	869 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	MST1	P07236	462 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	PET309	P32522	965 aa	Predicted RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	PCM1	P38628	557 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	CTM1	P38818	585 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	BST1	P43571	1029 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	IES1	P43579	692 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	PIG1	Q06216	648 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	VIP1	Q06685	1146 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	ATG11	Q12527	1178 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	EFG1	Q3E705	233 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	GCD2	P12754	651 aa	Predicted RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	THR4	P16120	514 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	SGF29	P25554	259 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	CCM1	P48237	864 aa	Predicted RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	HOP2	P53187	214 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	YNR065C	P53751	1116 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	MFB1	Q04922	465 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	SPN1	Q06505	410 aa	Predicted RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	SPE3	Q12074	293 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	NOT3	P06102	836 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	SCJ1	P25303	377 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	TFC3	P34111	1160 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RPO21	YDL140C	RPS0B	P46654	252 aa	Known RBP	4.1	□□□□□ -1.75
RPO21	YDL140C	DSE4	P53753	1117 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	ESP1	Q03018	1630 aa		4.1	□□□□□ -1.75
RPO21	YDL140C	TUF1	P02992	437 aa	Known RBP	4.09	□□□□□ -1.75
RPO21	YDL140C	MOB1	P40484	314 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	YIL089W	P40500	205 aa		4.09	□□□□□ -1.75
RPO21	YDL140C	SYH1	Q02875	849 aa	Known RBP	4.09	□□□□□ -1.75
RPO21	YDL140C	STE20	Q03497	939 aa	Known RBP	4.09	□□□□□ -1.75
RPO21	YDL140C	RGP1	P16664	663 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms