RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W ROX1P25042 368 aa4□□□□□ -1.77
NUP60YAR002W ECM21P38167 1117 aaKnown RBP4□□□□□ -1.77
NUP60YAR002W MGE1P38523 228 aa4□□□□□ -1.77
NUP60YAR002W CIC1P38779 376 aaKnown RBP4□□□□□ -1.77
NUP60YAR002W DJP1P40564 432 aa4□□□□□ -1.77
NUP60YAR002W HXT17P53631 564 aa4□□□□□ -1.77
NUP60YAR002W PDR18P53756 1333 aa4□□□□□ -1.77
NUP60YAR002W PKH1Q03407 766 aa4□□□□□ -1.77
NUP60YAR002W EMG1Q06287 252 aaKnown RBP4□□□□□ -1.77
NUP60YAR002W RSC2Q06488 889 aa4□□□□□ -1.77
NUP60YAR002W PHO4P07270 312 aaKnown RBP3.99□□□□□ -1.77
NUP60YAR002W VPS35P34110 944 aa3.99□□□□□ -1.77
NUP60YAR002W YER156CP40093 338 aaKnown RBP3.99□□□□□ -1.77
NUP60YAR002W LYS5P50113 272 aa3.99□□□□□ -1.77
NUP60YAR002W FCP1Q03254 732 aa3.99□□□□□ -1.77
NUP60YAR002W SYT1Q06836 1226 aa3.99□□□□□ -1.77
NUP60YAR002W NOC3Q07896 663 aaPredicted RBP3.99□□□□□ -1.77
NUP60YAR002W RIM15P43565 1770 aa3.99□□□□□ -1.77
NUP60YAR002W MSP1P28737 362 aa3.99□□□□□ -1.77
NUP60YAR002W YGL242CP53066 181 aa3.99□□□□□ -1.77
NUP60YAR002W MLC1P53141 149 aa3.99□□□□□ -1.77
NUP60YAR002W YGL082WP53155 381 aa3.99□□□□□ -1.77
NUP60YAR002W SNU71P53207 620 aaKnown RBP3.99□□□□□ -1.77
NUP60YAR002W RMD1Q03441 430 aa3.99□□□□□ -1.77
NUP60YAR002W BRE1Q07457 700 aaKnown RBP3.99□□□□□ -1.77
NUP60YAR002W RIM20Q12033 661 aa3.99□□□□□ -1.77
NUP60YAR002W SUP35P05453 685 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W RNR2P09938 399 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W PRP40P33203 583 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W SER1P33330 395 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W AAP1P37898 856 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W KTR3P38130 404 aaPredicted RBP3.98□□□□□ -1.77
NUP60YAR002W ECM2P38241 364 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W MSC7P38694 644 aa3.98□□□□□ -1.77
NUP60YAR002W YHL008CP38750 627 aa3.98□□□□□ -1.77
NUP60YAR002W MRPS35P53292 345 aa3.98□□□□□ -1.77
NUP60YAR002W ALO1P54783 526 aaKnown RBP3.98□□□□□ -1.77
NUP60YAR002W FPR4Q06205 392 aaPredicted RBP3.98□□□□□ -1.77
NUP60YAR002W RRP15Q06511 250 aaPredicted RBP3.98□□□□□ -1.77
NUP60YAR002W OXR1Q08952 273 aa3.98□□□□□ -1.77
NUP60YAR002W SAC3P46674 1301 aa3.97□□□□□ -1.77
NUP60YAR002W IDI1P15496 288 aa3.97□□□□□ -1.77
NUP60YAR002W ATE1P16639 503 aa3.97□□□□□ -1.77
NUP60YAR002W RPN11P43588 306 aaKnown RBP3.97□□□□□ -1.77
NUP60YAR002W TY1A-DR2Q03964 440 aaKnown RBP3.97□□□□□ -1.77
NUP60YAR002W SSK22P25390 1331 aaPredicted RBP3.96□□□□□ -1.77
NUP60YAR002W RPT1P33299 467 aaKnown RBP3.96□□□□□ -1.78
NUP60YAR002W DAK2P43550 591 aa3.96□□□□□ -1.78
NUP60YAR002W YJL181WP46987 611 aa3.96□□□□□ -1.78
NUP60YAR002W NPA3P47122 385 aa3.96□□□□□ -1.78
NUP60YAR002W PPT1P53043 513 aa3.96□□□□□ -1.78
NUP60YAR002W UBP16Q02863 499 aa3.96□□□□□ -1.78
NUP60YAR002W NYV1Q12255 253 aa3.96□□□□□ -1.78
NUP60YAR002W SNU66Q12420 587 aaPredicted RBP3.96□□□□□ -1.78
NUP60YAR002W UTP10P42945 1769 aaKnown RBP3.96□□□□□ -1.78
NUP60YAR002W FLP1P03870 423 aa3.95□□□□□ -1.78
NUP60YAR002W TRK2P28584 889 aa3.95□□□□□ -1.78
NUP60YAR002W PYC2P32327 1180 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W ARL1P38116 183 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W SLN1P39928 1220 aaPredicted RBP3.95□□□□□ -1.78
NUP60YAR002W PRK1P40494 810 aa3.95□□□□□ -1.78
NUP60YAR002W YJR107WP47145 328 aa3.95□□□□□ -1.78
NUP60YAR002W PIB2P53191 635 aa3.95□□□□□ -1.78
NUP60YAR002W CTR9P89105 1077 aa3.95□□□□□ -1.78
NUP60YAR002W VPS20Q04272 221 aa3.95□□□□□ -1.78
NUP60YAR002W YCS4Q06156 1176 aa3.95□□□□□ -1.78
NUP60YAR002W DPH6Q12429 685 aa3.95□□□□□ -1.78
NUP60YAR002W DUR1,2P32528 1835 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W TPM1P17536 199 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W SEC18P18759 758 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W SEC8P32855 1065 aa3.95□□□□□ -1.78
NUP60YAR002W BDH2P39713 417 aa3.95□□□□□ -1.78
NUP60YAR002W NPR2P39923 615 aa3.95□□□□□ -1.78
NUP60YAR002W KRI1P42846 591 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W COG8Q04632 607 aa3.95□□□□□ -1.78
NUP60YAR002W RPN7Q06103 429 aaKnown RBP3.95□□□□□ -1.78
NUP60YAR002W BIK1P11709 440 aa3.94□□□□□ -1.78
NUP60YAR002W PBY1P38254 753 aa3.94□□□□□ -1.78
NUP60YAR002W OSH3P38713 996 aaKnown RBP3.94□□□□□ -1.78
NUP60YAR002W SPO22P40511 975 aa3.94□□□□□ -1.78
NUP60YAR002W JJJ3P47138 172 aa3.94□□□□□ -1.78
NUP60YAR002W YGR035CP53222 116 aa3.94□□□□□ -1.78
NUP60YAR002W HST1P53685 503 aa3.94□□□□□ -1.78
NUP60YAR002W YNL193WP53870 558 aa3.94□□□□□ -1.78
NUP60YAR002W YMR074CQ04773 145 aa3.94□□□□□ -1.78
NUP60YAR002W HPF1Q05164 967 aa3.94□□□□□ -1.78
NUP60YAR002W ADR1P07248 1323 aa3.93□□□□□ -1.78
NUP60YAR002W FUS1P11710 512 aa3.93□□□□□ -1.78
NUP60YAR002W KNS1P32350 737 aaPredicted RBP3.93□□□□□ -1.78
NUP60YAR002W INP51P40559 946 aaKnown RBP3.93□□□□□ -1.78
NUP60YAR002W HYR1P40581 163 aaKnown RBP3.93□□□□□ -1.78
NUP60YAR002W OYE2Q03558 400 aaKnown RBP3.93□□□□□ -1.78
NUP60YAR002W MSH6Q03834 1242 aa3.93□□□□□ -1.78
NUP60YAR002W HRQ1Q05549 1077 aa3.93□□□□□ -1.78
NUP60YAR002W BUG1Q12191 341 aa3.93□□□□□ -1.78
NUP60YAR002W POM152P39685 1337 aa3.93□□□□□ -1.78
NUP60YAR002W GPM1P00950 247 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W RPL19AP0CX82 189 aaKnown RBP3.92□□□□□ -1.78
NUP60YAR002W RPL19BP0CX83 189 aaPredicted RBP3.92□□□□□ -1.78
NUP60YAR002W PDC5P16467 563 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms