RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Kdm4cQ8VCD7 1054 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ccdc96Q9CR92 584 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Mon2Q80TL7 1715 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Rab11fip3Q8CHD8 1047 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Smarca5Q91ZW3 1051 aaKnown RBP13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 FanclQ9CR14 375 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Kif1aP33173 1695 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Pik3c2aQ61194 1686 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Trim27Q62158 513 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Clcn1Q64347 994 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ppip5k2Q6ZQB6 1129 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Rnf214Q8BFU3 668 aaKnown RBP13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Dennd6aQ8BH65 605 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Tmem2Q5FWI3 1383 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Erbb4Q61527 1308 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 HomezQ80W88 542 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Cabp4Q8VHC5 271 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Uhrf1bp1lA2RSJ4 1457 aa13.17□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Eif4g2Q62448 906 aaKnown RBP13.16□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Klhdc4Q921I2 584 aa13.16□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Fam43bA2AM80 330 aa13.16□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Astn2Q80Z10 1352 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Pibf1E9Q6K3 756 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 1700010I14RikQ7TPG0 532 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Nlgn1Q99K10 843 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Unc13bQ9Z1N9 1602 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Col18a1P39061 1774 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ric3Q8BPM6 367 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Stac3Q8BZ71 360 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ripk4Q9ERK0 786 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Znf335A2A5K6 1337 aa13.15□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Tpm2P58774 284 aa13.15□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Pank2Q3U4S0 443 aa13.15□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Rbm27Q5SFM8 1060 aaKnown RBP13.15□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Rsph6aQ8CDR2 708 aa13.15□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Fyb1O35601 819 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Atf3Q60765 181 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Zkscan1Q8BGS3 561 aaKnown RBP13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 1700017N19RikA0A087WPJ1 469 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Gm9992B2RWK3 458 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 CalcaP70160 136 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Unc93aQ710D3 458 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Ush1cQ9ES64 910 aa13.14□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 FancaQ9JL70 1439 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Syce3B5KM66 88 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Cavin2Q63918 418 aaKnown RBP13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Fbxo2Q80UW2 297 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 EngaseQ8BX80 734 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 4931400O07RikQ9D4M5 137 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Gdpd2Q9ESM6 539 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Cc2d1aQ8K1A6 943 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Farp2Q91VS8 1065 aa13.13□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Gadd45bP22339 160 aa13.12□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 HnrnpuQ8VEK3 800 aaKnown RBP13.12□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Aifm3Q3TY86 605 aa13.12□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Col16a1Q8BLX7 1580 aa13.12□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 MarsQ68FL6 902 aaKnown RBP13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Cgnl1Q6AW69 1298 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 CenppQ9CZ92 286 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Q9D2X8 372 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Wdr17E9Q271 1322 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 MpripP97434 1024 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Sos1Q62245 1319 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Ppp6r3Q922D4 844 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Cdk12Q14AX6 1484 aaKnown RBP13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Pdia3P27773 505 aaKnown RBP13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Stk31Q99MW1 1018 aa13.11□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Becn1O88597 448 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Eif4a2P10630 407 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Tmem132eQ6IEE6 982 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Ubr1O70481 1757 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Camta1A2A891 1682 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Ncapd2Q8K2Z4 1392 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 MpndQ3TV65 487 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Aldh8a1Q8BH00 487 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Styxl1Q9DAR2 321 aa13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 SetQ9EQU5 289 aaKnown RBP13.1□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Ssr1Q9CY50 286 aaKnown RBP13.09□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Map2P20357 1828 aa13.09□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Fez1Q8K0X8 392 aa13.09□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 ImpactO55091 318 aa13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Hoxb7P09024 217 aa13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Nucb1Q02819 459 aaKnown RBP13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Nol12Q8BG17 217 aa13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Mknk2Q8CDB0 459 aa13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Cyp27a1Q9DBG1 533 aa13.08□□□□□ -0.31
Prpf40b-202ENSMUST00000118287 Gli3Q61602 1583 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 CemipQ8BI06 1361 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Zdhhc9P59268 364 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Cpa2Q504N0 417 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Kcna6Q61923 529 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Cnksr2Q80YA9 1032 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Spef2Q8C9J3 1734 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Phactr2B1AVP0 632 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Gzf1Q4VBD9 706 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Fam13aQ8BGI4 693 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Gcc1Q9D4H2 778 aa13.08□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Anapc15-psA0A140T8L6 141 aa13.07□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Brinp3Q499E0 766 aa13.07□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Aldh1l2Q8K009 923 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms