Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Gm25239-201ENSMUST00000174915 86 ntBASIC42.28■■■■■ 4.36
Ccdc96Q9CR92 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
Ccdc96Q9CR92 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
Ccdc96Q9CR92 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Ccdc96Q9CR92 Gm15042-201ENSMUST00000120212 883 ntBASIC36.86■■■■□ 3.49
Ccdc96Q9CR92 Gm24109-201ENSMUST00000175489 103 ntBASIC36.63■■■■□ 3.45
Ccdc96Q9CR92 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Ccdc96Q9CR92 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.26■■■■□ 3.4
Ccdc96Q9CR92 Gm15045-201ENSMUST00000117359 883 ntBASIC35.92■■■■□ 3.34
Ccdc96Q9CR92 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ccdc96Q9CR92 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Ccdc96Q9CR92 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
Ccdc96Q9CR92 Gm23366-201ENSMUST00000175022 89 ntBASIC35.41■■■■□ 3.26
Ccdc96Q9CR92 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ccdc96Q9CR92 Psd-208ENSMUST00000224556 2034 ntBASIC34.99■■■■□ 3.19
Ccdc96Q9CR92 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Ccdc96Q9CR92 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Ccdc96Q9CR92 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Ccdc96Q9CR92 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ccdc96Q9CR92 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.22■■■■□ 3.07
Ccdc96Q9CR92 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
Ccdc96Q9CR92 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Ccdc96Q9CR92 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.04■■■■□ 3.04
Ccdc96Q9CR92 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.97■■■■□ 3.03
Ccdc96Q9CR92 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.9■■■■□ 3.02
Ccdc96Q9CR92 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Ccdc96Q9CR92 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Ccdc96Q9CR92 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Ccdc96Q9CR92 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ccdc96Q9CR92 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.6■■■□□ 2.97
Ccdc96Q9CR92 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ccdc96Q9CR92 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ccdc96Q9CR92 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ccdc96Q9CR92 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Ccdc96Q9CR92 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ccdc96Q9CR92 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Ccdc96Q9CR92 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Ccdc96Q9CR92 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.39■■■□□ 2.94
Ccdc96Q9CR92 Gm25238-201ENSMUST00000174914 89 ntBASIC33.37■■■□□ 2.93
Ccdc96Q9CR92 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ccdc96Q9CR92 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.2■■■□□ 2.91
Ccdc96Q9CR92 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ccdc96Q9CR92 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc96Q9CR92 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
Ccdc96Q9CR92 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.84■■■□□ 2.85
Ccdc96Q9CR92 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc96Q9CR92 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ccdc96Q9CR92 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Ccdc96Q9CR92 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ccdc96Q9CR92 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
Ccdc96Q9CR92 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ccdc96Q9CR92 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.59■■■□□ 2.81
Ccdc96Q9CR92 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.57■■■□□ 2.8
Ccdc96Q9CR92 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc96Q9CR92 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc96Q9CR92 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.32■■■□□ 2.76
Ccdc96Q9CR92 Gm27325-201ENSMUST00000175467 74 ntBASIC32.28■■■□□ 2.76
Ccdc96Q9CR92 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc96Q9CR92 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.27■■■□□ 2.76
Ccdc96Q9CR92 Gm25262-201ENSMUST00000174934 133 ntBASIC32.22■■■□□ 2.75
Ccdc96Q9CR92 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ccdc96Q9CR92 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.11■■■□□ 2.73
Ccdc96Q9CR92 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Ccdc96Q9CR92 Gm10524-201ENSMUST00000181931 1893 ntBASIC32■■■□□ 2.71
Ccdc96Q9CR92 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc96Q9CR92 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc96Q9CR92 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc96Q9CR92 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc96Q9CR92 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc96Q9CR92 Rab21-202ENSMUST00000218831 843 ntBASIC31.85■■■□□ 2.69
Ccdc96Q9CR92 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ccdc96Q9CR92 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.81■■■□□ 2.68
Ccdc96Q9CR92 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.77■■■□□ 2.68
Ccdc96Q9CR92 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.69■■■□□ 2.66
Ccdc96Q9CR92 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc96Q9CR92 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc96Q9CR92 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.56■■■□□ 2.64
Ccdc96Q9CR92 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc96Q9CR92 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc96Q9CR92 Gm26115-201ENSMUST00000175605 87 ntBASIC31.48■■■□□ 2.63
Ccdc96Q9CR92 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc96Q9CR92 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Ccdc96Q9CR92 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Ccdc96Q9CR92 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc96Q9CR92 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc96Q9CR92 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.31■■■□□ 2.6
Ccdc96Q9CR92 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc96Q9CR92 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc96Q9CR92 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc96Q9CR92 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc96Q9CR92 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.27■■■□□ 2.6
Ccdc96Q9CR92 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc96Q9CR92 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
Ccdc96Q9CR92 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc96Q9CR92 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.23■■■□□ 2.59
Ccdc96Q9CR92 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc96Q9CR92 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Ccdc96Q9CR92 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.16■■■□□ 2.58
Ccdc96Q9CR92 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc96Q9CR92 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms