Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm25239-201ENSMUST00000174915 86 ntBASIC38,1■■■■□ 3,69
Ssr1Q9CY50 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36,5■■■■□ 3,43
Ssr1Q9CY50 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35,39■■■■□ 3,26
Ssr1Q9CY50 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35,21■■■■□ 3,23
Ssr1Q9CY50 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,91■■■■□ 3,18
Ssr1Q9CY50 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34,53■■■■□ 3,12
Ssr1Q9CY50 Gm15042-201ENSMUST00000120212 883 ntBASIC33,97■■■■□ 3,03
Ssr1Q9CY50 Psd-208ENSMUST00000224556 2034 ntBASIC33,96■■■■□ 3,03
Ssr1Q9CY50 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,83■■■■□ 3,01
Ssr1Q9CY50 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33,29■■■□□ 2,92
Ssr1Q9CY50 Gm15045-201ENSMUST00000117359 883 ntBASIC33,29■■■□□ 2,92
Ssr1Q9CY50 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,01■■■□□ 2,88
Ssr1Q9CY50 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33■■■□□ 2,87
Ssr1Q9CY50 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Ssr1Q9CY50 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,71■■■□□ 2,83
Ssr1Q9CY50 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,69■■■□□ 2,82
Ssr1Q9CY50 Gm24109-201ENSMUST00000175489 103 ntBASIC32,66■■■□□ 2,82
Ssr1Q9CY50 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Ssr1Q9CY50 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Ssr1Q9CY50 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Ssr1Q9CY50 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,44■■■□□ 2,78
Ssr1Q9CY50 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,26■■■□□ 2,75
Ssr1Q9CY50 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Ssr1Q9CY50 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,24■■■□□ 2,75
Ssr1Q9CY50 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,19■■■□□ 2,74
Ssr1Q9CY50 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,07■■■□□ 2,72
Ssr1Q9CY50 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,01■■■□□ 2,71
Ssr1Q9CY50 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Ssr1Q9CY50 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,91■■■□□ 2,7
Ssr1Q9CY50 Gm23366-201ENSMUST00000175022 89 ntBASIC31,91■■■□□ 2,7
Ssr1Q9CY50 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,82■■■□□ 2,68
Ssr1Q9CY50 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,77■■■□□ 2,68
Ssr1Q9CY50 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,77■■■□□ 2,68
Ssr1Q9CY50 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Ssr1Q9CY50 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,7■■■□□ 2,67
Ssr1Q9CY50 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,69■■■□□ 2,66
Ssr1Q9CY50 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Ssr1Q9CY50 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Ssr1Q9CY50 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Ssr1Q9CY50 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,46■■■□□ 2,63
Ssr1Q9CY50 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,26■■■□□ 2,59
Ssr1Q9CY50 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31,19■■■□□ 2,58
Ssr1Q9CY50 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,19■■■□□ 2,58
Ssr1Q9CY50 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,18■■■□□ 2,58
Ssr1Q9CY50 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31,14■■■□□ 2,58
Ssr1Q9CY50 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,08■■■□□ 2,57
Ssr1Q9CY50 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31,04■■■□□ 2,56
Ssr1Q9CY50 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,55
Ssr1Q9CY50 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Ssr1Q9CY50 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,96■■■□□ 2,55
Ssr1Q9CY50 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,5
Ssr1Q9CY50 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Ssr1Q9CY50 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30,5■■■□□ 2,47
Ssr1Q9CY50 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ssr1Q9CY50 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Ssr1Q9CY50 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,39■■■□□ 2,46
Ssr1Q9CY50 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Ssr1Q9CY50 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,3■■■□□ 2,44
Ssr1Q9CY50 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30,3■■■□□ 2,44
Ssr1Q9CY50 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Ssr1Q9CY50 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30,22■■■□□ 2,43
Ssr1Q9CY50 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,21■■■□□ 2,43
Ssr1Q9CY50 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Ssr1Q9CY50 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,18■■■□□ 2,42
Ssr1Q9CY50 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Ssr1Q9CY50 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,14■■■□□ 2,42
Ssr1Q9CY50 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30,11■■■□□ 2,41
Ssr1Q9CY50 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,11■■■□□ 2,41
Ssr1Q9CY50 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Ssr1Q9CY50 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Ssr1Q9CY50 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29,96■■■□□ 2,39
Ssr1Q9CY50 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29,96■■■□□ 2,39
Ssr1Q9CY50 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29,95■■■□□ 2,38
Ssr1Q9CY50 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Ssr1Q9CY50 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29,93■■■□□ 2,38
Ssr1Q9CY50 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Ssr1Q9CY50 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Ssr1Q9CY50 Gm27325-201ENSMUST00000175467 74 ntBASIC29,87■■■□□ 2,37
Ssr1Q9CY50 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29,84■■■□□ 2,37
Ssr1Q9CY50 Gm25238-201ENSMUST00000174914 89 ntBASIC29,84■■■□□ 2,37
Ssr1Q9CY50 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Ssr1Q9CY50 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,82■■■□□ 2,36
Ssr1Q9CY50 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,79■■■□□ 2,36
Ssr1Q9CY50 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Ssr1Q9CY50 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Ssr1Q9CY50 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,75■■■□□ 2,35
Ssr1Q9CY50 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Ssr1Q9CY50 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Ssr1Q9CY50 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Ssr1Q9CY50 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,58■■■□□ 2,33
Ssr1Q9CY50 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Ssr1Q9CY50 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Ssr1Q9CY50 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Ssr1Q9CY50 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,49■■■□□ 2,31
Ssr1Q9CY50 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ssr1Q9CY50 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ssr1Q9CY50 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Ssr1Q9CY50 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,3
Ssr1Q9CY50 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,42■■■□□ 2,3
Ssr1Q9CY50 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms