Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 SLC25A6P5-201ENST00000435663 894 ntBASIC15.24■□□□□ 0.03
RAB40CQ96S21 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB40CQ96S21 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB40CQ96S21 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.23■□□□□ 0.03
RAB40CQ96S21 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 AC092666.2-201ENST00000613287 246 ntBASIC15.23■□□□□ 0.03
RAB40CQ96S21 AL121906.2-201ENST00000621597 723 ntBASIC15.23■□□□□ 0.03
RAB40CQ96S21 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RAB40CQ96S21 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB40CQ96S21 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms