Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 TSPY23P-201ENST00000440136 739 ntBASIC18.1■□□□□ 0.49
RNF31Q96EP0 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.1■□□□□ 0.49
RNF31Q96EP0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 AC008622.2-201ENST00000617006 1229 ntBASIC18.1■□□□□ 0.49
RNF31Q96EP0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF31Q96EP0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.09■□□□□ 0.49
RNF31Q96EP0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF31Q96EP0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF31Q96EP0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.08■□□□□ 0.49
RNF31Q96EP0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
RNF31Q96EP0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF31Q96EP0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RNF31Q96EP0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RNF31Q96EP0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF31Q96EP0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF31Q96EP0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF31Q96EP0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 MYC-208ENST00000641036 567 ntBASIC18.08■□□□□ 0.48
RNF31Q96EP0 AC116562.4-201ENST00000641316 2276 ntBASIC18.08■□□□□ 0.48
RNF31Q96EP0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF31Q96EP0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF31Q96EP0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF31Q96EP0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms