Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 AL137013.1-201ENST00000432946 1228 ntBASIC20.01■□□□□ 0.79
DDX1Q92499 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 AC097488.1-201ENST00000507834 756 ntBASIC20.01■□□□□ 0.79
DDX1Q92499 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX1Q92499 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.01■□□□□ 0.79
DDX1Q92499 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX1Q92499 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX1Q92499 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX1Q92499 AL499627.1-201ENST00000569373 2188 ntBASIC20.01■□□□□ 0.79
DDX1Q92499 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
DDX1Q92499 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20■□□□□ 0.79
DDX1Q92499 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20■□□□□ 0.79
DDX1Q92499 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 SLC25A1P4-201ENST00000567977 778 ntBASIC20■□□□□ 0.79
DDX1Q92499 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDX1Q92499 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20■□□□□ 0.79
DDX1Q92499 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20■□□□□ 0.79
DDX1Q92499 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20■□□□□ 0.79
DDX1Q92499 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX1Q92499 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
DDX1Q92499 AL357033.4-201ENST00000617703 1807 ntBASIC19.99■□□□□ 0.79
DDX1Q92499 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
DDX1Q92499 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 RCC2P3-201ENST00000418112 1537 ntBASIC19.99■□□□□ 0.79
DDX1Q92499 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX1Q92499 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDX1Q92499 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
DDX1Q92499 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX1Q92499 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX1Q92499 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX1Q92499 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX1Q92499 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DDX1Q92499 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX1Q92499 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDX1Q92499 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 KRT18P22-201ENST00000402024 1347 ntBASIC19.99■□□□□ 0.79
DDX1Q92499 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX1Q92499 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX1Q92499 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
DDX1Q92499 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX1Q92499 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX1Q92499 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX1Q92499 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX1Q92499 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.98■□□□□ 0.79
DDX1Q92499 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.98■□□□□ 0.79
DDX1Q92499 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.98■□□□□ 0.79
DDX1Q92499 NTF6B-201ENST00000591913 560 ntBASIC19.98■□□□□ 0.79
DDX1Q92499 AC090164.3-201ENST00000610780 2143 ntBASIC19.98■□□□□ 0.79
DDX1Q92499 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDX1Q92499 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms