Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 GPAT2P1-201ENST00000444924 1672 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AL023284.2-201ENST00000405850 579 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AL390955.1-201ENST00000428694 934 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 C2orf69P3-201ENST00000565542 1120 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AL353719.1-201ENST00000566847 864 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 WIZP1-201ENST00000531444 2299 ntBASIC16.44■□□□□ 0.22
FAM27BQ5VT28 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.44■□□□□ 0.22
FAM27BQ5VT28 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 AC008556.1-201ENST00000610908 2040 ntBASIC16.43■□□□□ 0.22
FAM27BQ5VT28 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 MCCD1P1-208ENST00000445732 328 ntBASIC16.43■□□□□ 0.22
FAM27BQ5VT28 CCR12P-201ENST00000446203 998 ntBASIC16.43■□□□□ 0.22
FAM27BQ5VT28 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 MYC-208ENST00000641036 567 ntBASIC16.43■□□□□ 0.22
FAM27BQ5VT28 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
FAM27BQ5VT28 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 AC116562.4-202ENST00000641738 218 ntBASIC16.42■□□□□ 0.22
FAM27BQ5VT28 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 AC092338.2-201ENST00000568827 1415 ntBASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM27BQ5VT28 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
FAM27BQ5VT28 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms