Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 CR392000.1-201ENST00000624770 1228 ntBASIC18.12■□□□□ 0.49
HMGCS1Q01581 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HMGCS1Q01581 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCS1Q01581 AC018470.1-201ENST00000624790 3129 ntBASIC18.12■□□□□ 0.49
HMGCS1Q01581 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 PRSS44-201ENST00000515154 1146 ntBASIC18.11■□□□□ 0.49
HMGCS1Q01581 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 AL499627.1-201ENST00000569373 2188 ntBASIC18.11■□□□□ 0.49
HMGCS1Q01581 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HMGCS1Q01581 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCS1Q01581 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 AL390961.4-201ENST00000623958 2535 ntBASIC18.1■□□□□ 0.49
HMGCS1Q01581 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 KRT16P1-201ENST00000399124 1418 ntBASIC18.1■□□□□ 0.49
HMGCS1Q01581 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 AC004951.3-201ENST00000418645 1148 ntBASIC18.1■□□□□ 0.49
HMGCS1Q01581 AC008040.2-201ENST00000461049 708 ntBASIC18.1■□□□□ 0.49
HMGCS1Q01581 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMGCS1Q01581 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGCS1Q01581 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.09■□□□□ 0.49
HMGCS1Q01581 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 MTMR9LP-203ENST00000426597 1545 ntBASIC18.09■□□□□ 0.49
HMGCS1Q01581 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 AL353807.1-201ENST00000427475 662 ntBASIC18.09■□□□□ 0.49
HMGCS1Q01581 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms