Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GABREP78334 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GABREP78334 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
GABREP78334 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.85■□□□□ 0.45
GABREP78334 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 KRT18P31-201ENST00000506277 1292 ntBASIC17.85■□□□□ 0.45
GABREP78334 AC079776.4-201ENST00000511039 504 ntBASIC17.85■□□□□ 0.45
GABREP78334 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
GABREP78334 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
GABREP78334 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 RNF126P1-202ENST00000569893 925 ntBASIC17.85■□□□□ 0.45
GABREP78334 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.85■□□□□ 0.45
GABREP78334 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 AC006538.3-201ENST00000612495 578 ntBASIC17.85■□□□□ 0.45
GABREP78334 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GABREP78334 AL391422.3-201ENST00000603791 2761 ntBASIC17.85■□□□□ 0.45
GABREP78334 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
GABREP78334 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
GABREP78334 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
GABREP78334 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.84■□□□□ 0.45
GABREP78334 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.84■□□□□ 0.45
GABREP78334 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.84■□□□□ 0.45
GABREP78334 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.84■□□□□ 0.45
GABREP78334 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.84■□□□□ 0.45
GABREP78334 AC004263.2-201ENST00000617183 678 ntBASIC17.84■□□□□ 0.45
GABREP78334 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GABREP78334 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GABREP78334 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.84■□□□□ 0.45
GABREP78334 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.83■□□□□ 0.45
GABREP78334 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.83■□□□□ 0.45
GABREP78334 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GABREP78334 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.83■□□□□ 0.45
GABREP78334 SDHAP1-207ENST00000440850 2000 ntBASIC17.83■□□□□ 0.45
GABREP78334 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.83■□□□□ 0.44
GABREP78334 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.83■□□□□ 0.44
GABREP78334 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.83■□□□□ 0.44
GABREP78334 AC104819.1-201ENST00000504587 486 ntBASIC17.83■□□□□ 0.44
GABREP78334 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.83■□□□□ 0.44
GABREP78334 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.83■□□□□ 0.44
GABREP78334 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.83■□□□□ 0.44
GABREP78334 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.83■□□□□ 0.44
GABREP78334 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.83■□□□□ 0.44
GABREP78334 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.83■□□□□ 0.44
GABREP78334 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABREP78334 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GABREP78334 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
GABREP78334 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.82■□□□□ 0.44
GABREP78334 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
GABREP78334 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GABREP78334 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.82■□□□□ 0.44
GABREP78334 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.82■□□□□ 0.44
GABREP78334 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms