Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM235A6NFC5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 AF201337.1-201ENST00000520239 748 ntBASIC16.05■□□□□ 0.16
TMEM235A6NFC5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM235A6NFC5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 OR6D1P-202ENST00000641007 5290 ntBASIC16.04■□□□□ 0.16
TMEM235A6NFC5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 TSPY21P-201ENST00000433481 731 ntBASIC16.04■□□□□ 0.16
TMEM235A6NFC5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM235A6NFC5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.03■□□□□ 0.16
TMEM235A6NFC5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 DUSP5P2-201ENST00000426873 1033 ntBASIC16.03■□□□□ 0.16
TMEM235A6NFC5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM235A6NFC5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms