Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.71■□□□□ 0.43
KLHL1Q9NR64 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 EGLN1P1-201ENST00000531623 762 ntBASIC17.71■□□□□ 0.43
KLHL1Q9NR64 AL160286.2-201ENST00000567150 934 ntBASIC17.71■□□□□ 0.43
KLHL1Q9NR64 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KLHL1Q9NR64 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 INGX-201ENST00000359239 846 ntBASIC17.7■□□□□ 0.42
KLHL1Q9NR64 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 AC128688.1-201ENST00000487626 519 ntBASIC17.7■□□□□ 0.42
KLHL1Q9NR64 Z85996.1-201ENST00000494644 937 ntBASIC17.7■□□□□ 0.42
KLHL1Q9NR64 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KLHL1Q9NR64 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 TSPY14P-201ENST00000303979 915 ntBASIC17.69■□□□□ 0.42
KLHL1Q9NR64 ARMC10P1-201ENST00000313754 855 ntBASIC17.69■□□□□ 0.42
KLHL1Q9NR64 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 KRT18P35-201ENST00000510488 1269 ntBASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AC010203.1-204ENST00000548782 407 ntBASIC17.69■□□□□ 0.42
KLHL1Q9NR64 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KLHL1Q9NR64 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KLHL1Q9NR64 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms