Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC24A3Q9HC58 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 AC128676.1-201ENST00000454392 318 ntBASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 AC098590.1-201ENST00000468126 897 ntBASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC24A3Q9HC58 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 RBM17P2-201ENST00000616397 1405 ntBASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 AL158047.1-201ENST00000445918 881 ntBASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC24A3Q9HC58 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 MIR718-201ENST00000390190 70 ntBASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 UBE2SP1-201ENST00000450587 669 ntBASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 UNC93B5-201ENST00000530315 699 ntBASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 AC121338.2-201ENST00000622535 1744 ntBASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC24A3Q9HC58 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 AC092850.2-201ENST00000623821 2697 ntBASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 SIRPAP1-201ENST00000448467 1770 ntBASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC24A3Q9HC58 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms