Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SOX15-203ENST00000570788 1093 ntBASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 AC126763.1-201ENST00000552015 2118 ntBASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 AC073592.3-201ENST00000625118 1834 ntBASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 AC008687.6-201ENST00000596318 630 ntBASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 AL121829.2-201ENST00000620908 328 ntBASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC47A1Q96FL8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 FZD10-202ENST00000539839 3282 ntBASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 AC067852.2-201ENST00000590513 2313 ntBASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC47A1Q96FL8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms