Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 TOB2P1-201ENST00000469761 992 ntBASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 AL158211.5-201ENST00000623583 2518 ntBASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OTOP1Q7RTM1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 AC024243.1-201ENST00000609234 778 ntBASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 AC104417.2-201ENST00000562989 1793 ntBASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.78■■□□□ 1.08
OTOP1Q7RTM1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 AC079602.3-201ENST00000623931 403 ntBASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 ZNF815P-204ENST00000434898 1737 ntBASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
OTOP1Q7RTM1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
OTOP1Q7RTM1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
OTOP1Q7RTM1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 AL353801.3-201ENST00000609898 542 ntBASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
OTOP1Q7RTM1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
OTOP1Q7RTM1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms