Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLCNKAP51800 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 GPAT2P1-201ENST00000444924 1672 ntBASIC18.44■□□□□ 0.54
CLCNKAP51800 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCNKAP51800 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 YBX1P2-201ENST00000489612 999 ntBASIC18.44■□□□□ 0.54
CLCNKAP51800 AC063952.2-201ENST00000498792 1227 ntBASIC18.44■□□□□ 0.54
CLCNKAP51800 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.44■□□□□ 0.54
CLCNKAP51800 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 AC139887.4-201ENST00000607877 719 ntBASIC18.44■□□□□ 0.54
CLCNKAP51800 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCNKAP51800 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLCNKAP51800 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCNKAP51800 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCNKAP51800 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCNKAP51800 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLCNKAP51800 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCNKAP51800 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLCNKAP51800 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 TSPY5P-201ENST00000426936 936 ntBASIC18.43■□□□□ 0.54
CLCNKAP51800 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.43■□□□□ 0.54
CLCNKAP51800 MCCD1P1-208ENST00000445732 328 ntBASIC18.43■□□□□ 0.54
CLCNKAP51800 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.43■□□□□ 0.54
CLCNKAP51800 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.43■□□□□ 0.54
CLCNKAP51800 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.43■□□□□ 0.54
CLCNKAP51800 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLCNKAP51800 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 AL049812.1-201ENST00000432563 2267 ntBASIC18.43■□□□□ 0.54
CLCNKAP51800 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCNKAP51800 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLCNKAP51800 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLCNKAP51800 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLCNKAP51800 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 AL109659.2-201ENST00000606809 1674 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 FAM8A6P-201ENST00000407496 1135 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.42■□□□□ 0.54
CLCNKAP51800 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLCNKAP51800 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 LINC01238-205ENST00000567549 1107 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCNKAP51800 MIR3180-5-201ENST00000583743 153 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 AC011558.1-201ENST00000623459 338 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 AL512353.2-201ENST00000448759 1962 ntBASIC18.42■□□□□ 0.54
CLCNKAP51800 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
CLCNKAP51800 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.42■□□□□ 0.54
CLCNKAP51800 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLCNKAP51800 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms