Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 AL133373.2-201ENST00000623187 2828 ntBASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THUMPD3Q9BV44 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 AC120498.8-201ENST00000614275 531 ntBASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
THUMPD3Q9BV44 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
THUMPD3Q9BV44 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 AL354751.1-201ENST00000412768 1863 ntBASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 UNC93B4-201ENST00000505679 747 ntBASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 UNC93B5-201ENST00000530315 699 ntBASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 AC008687.6-201ENST00000596318 630 ntBASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 AC083906.6-201ENST00000641366 219 ntBASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
THUMPD3Q9BV44 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms