Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VRK1Q99986 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.64■□□□□ 0.25
VRK1Q99986 MIR1238-201ENST00000408483 83 ntBASIC16.64■□□□□ 0.25
VRK1Q99986 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VRK1Q99986 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.64■□□□□ 0.25
VRK1Q99986 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.64■□□□□ 0.25
VRK1Q99986 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK1Q99986 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK1Q99986 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.63■□□□□ 0.25
VRK1Q99986 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VRK1Q99986 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK1Q99986 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.63■□□□□ 0.25
VRK1Q99986 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.63■□□□□ 0.25
VRK1Q99986 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.63■□□□□ 0.25
VRK1Q99986 AC131212.4-201ENST00000623606 975 ntBASIC16.63■□□□□ 0.25
VRK1Q99986 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VRK1Q99986 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
VRK1Q99986 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VRK1Q99986 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VRK1Q99986 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK1Q99986 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK1Q99986 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.62■□□□□ 0.25
VRK1Q99986 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
VRK1Q99986 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VRK1Q99986 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VRK1Q99986 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK1Q99986 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK1Q99986 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.62■□□□□ 0.25
VRK1Q99986 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK1Q99986 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.62■□□□□ 0.25
VRK1Q99986 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.62■□□□□ 0.25
VRK1Q99986 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
VRK1Q99986 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VRK1Q99986 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.62■□□□□ 0.25
VRK1Q99986 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VRK1Q99986 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VRK1Q99986 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VRK1Q99986 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VRK1Q99986 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK1Q99986 AC079598.2-202ENST00000546624 1451 ntBASIC16.61■□□□□ 0.25
VRK1Q99986 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK1Q99986 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.61■□□□□ 0.25
VRK1Q99986 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
VRK1Q99986 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VRK1Q99986 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VRK1Q99986 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms