Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 AC135050.7-201ENST00000624508 2218 ntBASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 AL355355.2-201ENST00000442321 338 ntBASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 GPAT2P1-201ENST00000444924 1672 ntBASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 AC008556.1-201ENST00000610908 2040 ntBASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZC3H3Q8IXZ2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 RBM17P1-201ENST00000453646 1190 ntBASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZC3H3Q8IXZ2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 AC112777.1-201ENST00000540175 1423 ntBASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 MIR4674-201ENST00000582457 87 ntBASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 AL023803.3-201ENST00000615559 522 ntBASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H3Q8IXZ2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.45■□□□□ 0.87
ZC3H3Q8IXZ2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 TSPY7P-201ENST00000431358 1114 ntBASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H3Q8IXZ2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms