Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.67■□□□□ 0.26
MSR1P21757 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.67■□□□□ 0.26
MSR1P21757 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MSR1P21757 AC233702.5-201ENST00000584107 538 ntBASIC16.67■□□□□ 0.26
MSR1P21757 TMEM191A-211ENST00000637163 1067 ntBASIC16.67■□□□□ 0.26
MSR1P21757 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.67■□□□□ 0.26
MSR1P21757 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MSR1P21757 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MSR1P21757 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MSR1P21757 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.66■□□□□ 0.26
MSR1P21757 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MSR1P21757 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
MSR1P21757 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.66■□□□□ 0.26
MSR1P21757 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.66■□□□□ 0.26
MSR1P21757 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.66■□□□□ 0.26
MSR1P21757 AC008040.2-201ENST00000461049 708 ntBASIC16.66■□□□□ 0.26
MSR1P21757 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MSR1P21757 CKBP1-201ENST00000565489 1086 ntBASIC16.66■□□□□ 0.26
MSR1P21757 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.66■□□□□ 0.26
MSR1P21757 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MSR1P21757 AL049637.2-201ENST00000641778 930 ntBASIC16.66■□□□□ 0.26
MSR1P21757 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MSR1P21757 Z98044.1-201ENST00000632503 1764 ntBASIC16.66■□□□□ 0.26
MSR1P21757 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.66■□□□□ 0.26
MSR1P21757 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MSR1P21757 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
MSR1P21757 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MSR1P21757 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MSR1P21757 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.65■□□□□ 0.26
MSR1P21757 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MSR1P21757 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.65■□□□□ 0.26
MSR1P21757 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
MSR1P21757 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 NUDT16P1-203ENST00000513809 620 ntBASIC16.65■□□□□ 0.26
MSR1P21757 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.65■□□□□ 0.26
MSR1P21757 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.65■□□□□ 0.26
MSR1P21757 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.65■□□□□ 0.26
MSR1P21757 AC113410.3-201ENST00000623366 203 ntBASIC16.65■□□□□ 0.26
MSR1P21757 AL138781.2-201ENST00000617896 1843 ntBASIC16.65■□□□□ 0.26
MSR1P21757 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.65■□□□□ 0.26
MSR1P21757 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MSR1P21757 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
MSR1P21757 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MSR1P21757 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
MSR1P21757 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
MSR1P21757 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.64■□□□□ 0.26
MSR1P21757 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
MSR1P21757 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
MSR1P21757 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 MESTP1-201ENST00000404287 994 ntBASIC16.64■□□□□ 0.25
MSR1P21757 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MSR1P21757 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.64■□□□□ 0.25
MSR1P21757 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.64■□□□□ 0.25
MSR1P21757 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms