Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC135050.7-201ENST00000624508 2218 ntBASIC18.78■□□□□ 0.6
PHGDHO43175 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.78■□□□□ 0.6
PHGDHO43175 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.78■□□□□ 0.6
PHGDHO43175 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.78■□□□□ 0.6
PHGDHO43175 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.78■□□□□ 0.6
PHGDHO43175 AC124016.1-201ENST00000609552 612 ntBASIC18.78■□□□□ 0.6
PHGDHO43175 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PHGDHO43175 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.78■□□□□ 0.6
PHGDHO43175 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PHGDHO43175 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
PHGDHO43175 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
PHGDHO43175 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHGDHO43175 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 LETM1P2-201ENST00000597330 2178 ntBASIC18.77■□□□□ 0.6
PHGDHO43175 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.77■□□□□ 0.6
PHGDHO43175 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.77■□□□□ 0.6
PHGDHO43175 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHGDHO43175 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHGDHO43175 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PHGDHO43175 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.77■□□□□ 0.59
PHGDHO43175 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.77■□□□□ 0.59
PHGDHO43175 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
PHGDHO43175 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.76■□□□□ 0.59
PHGDHO43175 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.76■□□□□ 0.59
PHGDHO43175 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 AL390961.4-201ENST00000623958 2535 ntBASIC18.76■□□□□ 0.59
PHGDHO43175 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHGDHO43175 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHGDHO43175 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.76■□□□□ 0.59
PHGDHO43175 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.75■□□□□ 0.59
PHGDHO43175 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PHGDHO43175 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.75■□□□□ 0.59
PHGDHO43175 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.75■□□□□ 0.59
PHGDHO43175 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PHGDHO43175 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 AC073648.6-201ENST00000641589 218 ntBASIC18.75■□□□□ 0.59
PHGDHO43175 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms