Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.27□□□□□ -0.28
TMEM238C9JI98 LINC02228-204ENST00000642115 2962 ntBASIC13.27□□□□□ -0.28
TMEM238C9JI98 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM238C9JI98 AL161938.1-201ENST00000569833 2180 ntBASIC13.27□□□□□ -0.28
TMEM238C9JI98 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 KRT8P36-201ENST00000489121 1440 ntBASIC13.27□□□□□ -0.29
TMEM238C9JI98 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 AC061975.6-201ENST00000579045 1553 ntBASIC13.27□□□□□ -0.29
TMEM238C9JI98 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM238C9JI98 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM238C9JI98 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AL136116.3-201ENST00000402907 1138 ntBASIC13.26□□□□□ -0.29
TMEM238C9JI98 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM238C9JI98 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM238C9JI98 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 MIR4767-201ENST00000582827 78 ntBASIC13.25□□□□□ -0.29
TMEM238C9JI98 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.25□□□□□ -0.29
TMEM238C9JI98 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TMEM238C9JI98 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms