Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCA10Q71F78 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCA10Q71F78 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LCA10Q71F78 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LCA10Q71F78 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.2□□□□□ -0.78
LCA10Q71F78 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LCA10Q71F78 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.19□□□□□ -0.78
LCA10Q71F78 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 AC099791.1-201ENST00000416440 715 ntBASIC10.19□□□□□ -0.78
LCA10Q71F78 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC10.19□□□□□ -0.78
LCA10Q71F78 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC10.19□□□□□ -0.78
LCA10Q71F78 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 AC011484.1-201ENST00000377652 1995 ntBASIC10.19□□□□□ -0.78
LCA10Q71F78 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 AC126755.1-201ENST00000525846 6405 ntBASIC10.19□□□□□ -0.78
LCA10Q71F78 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.19□□□□□ -0.78
LCA10Q71F78 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCA10Q71F78 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC10.18□□□□□ -0.78
LCA10Q71F78 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LCA10Q71F78 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC10.18□□□□□ -0.78
LCA10Q71F78 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LCA10Q71F78 LINC01465-201ENST00000408887 1940 ntBASIC10.18□□□□□ -0.78
LCA10Q71F78 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCA10Q71F78 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms