Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 AL390955.1-201ENST00000428694 934 ntBASIC17.71■□□□□ 0.43
RTL4Q6ZR62 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 NAPSB-206ENST00000562112 1266 ntBASIC17.71■□□□□ 0.43
RTL4Q6ZR62 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTL4Q6ZR62 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
RTL4Q6ZR62 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 CRYGFP-201ENST00000418459 633 ntBASIC17.7■□□□□ 0.42
RTL4Q6ZR62 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 AC091390.4-202ENST00000476426 537 ntBASIC17.7■□□□□ 0.42
RTL4Q6ZR62 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 SLC25A1P4-201ENST00000567977 778 ntBASIC17.7■□□□□ 0.42
RTL4Q6ZR62 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 AC097493.4-201ENST00000641197 219 ntBASIC17.7■□□□□ 0.42
RTL4Q6ZR62 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTL4Q6ZR62 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 LINC01465-201ENST00000408887 1940 ntBASIC17.69■□□□□ 0.42
RTL4Q6ZR62 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 KRT8P9-201ENST00000558927 1449 ntBASIC17.69■□□□□ 0.42
RTL4Q6ZR62 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTL4Q6ZR62 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL4Q6ZR62 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL4Q6ZR62 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
RTL4Q6ZR62 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTL4Q6ZR62 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms