Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM228BP0C875 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM228BP0C875 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM228BP0C875 KRT8P11-201ENST00000409686 1436 ntBASIC20.18■□□□□ 0.82
FAM228BP0C875 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM228BP0C875 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.17■□□□□ 0.82
FAM228BP0C875 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.17■□□□□ 0.82
FAM228BP0C875 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 AL499627.1-201ENST00000569373 2188 ntBASIC20.17■□□□□ 0.82
FAM228BP0C875 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 AC124016.1-201ENST00000609552 612 ntBASIC20.17■□□□□ 0.82
FAM228BP0C875 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 AC073592.3-201ENST00000625118 1834 ntBASIC20.17■□□□□ 0.82
FAM228BP0C875 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
FAM228BP0C875 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.17■□□□□ 0.82
FAM228BP0C875 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM228BP0C875 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.16■□□□□ 0.82
FAM228BP0C875 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
FAM228BP0C875 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 AC005332.8-201ENST00000622750 2735 ntBASIC20.16■□□□□ 0.82
FAM228BP0C875 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.16■□□□□ 0.82
FAM228BP0C875 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.16■□□□□ 0.82
FAM228BP0C875 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.16■□□□□ 0.82
FAM228BP0C875 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.16■□□□□ 0.82
FAM228BP0C875 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FAM228BP0C875 MTMR9LP-203ENST00000426597 1545 ntBASIC20.16■□□□□ 0.82
FAM228BP0C875 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.16■□□□□ 0.82
FAM228BP0C875 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM228BP0C875 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 ESRRAP1-201ENST00000400596 1257 ntBASIC20.15■□□□□ 0.82
FAM228BP0C875 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.15■□□□□ 0.82
FAM228BP0C875 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.15■□□□□ 0.82
FAM228BP0C875 AL445675.2-201ENST00000620291 557 ntBASIC20.15■□□□□ 0.82
FAM228BP0C875 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FAM228BP0C875 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FAM228BP0C875 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM228BP0C875 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM228BP0C875 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.15■□□□□ 0.82
FAM228BP0C875 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FAM228BP0C875 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FAM228BP0C875 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FAM228BP0C875 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FAM228BP0C875 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
FAM228BP0C875 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 NOC2LP1-202ENST00000452600 2235 ntBASIC20.14■□□□□ 0.81
FAM228BP0C875 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
FAM228BP0C875 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.14■□□□□ 0.81
FAM228BP0C875 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM228BP0C875 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms