Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.71■■□□□ 1.23
CHGBP05060 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.71■■□□□ 1.23
CHGBP05060 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 AL137013.1-201ENST00000432946 1228 ntBASIC22.71■■□□□ 1.23
CHGBP05060 AC128688.1-201ENST00000487626 519 ntBASIC22.71■■□□□ 1.23
CHGBP05060 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 CR769767.2-201ENST00000622735 460 ntBASIC22.71■■□□□ 1.23
CHGBP05060 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
CHGBP05060 AC099343.3-201ENST00000605834 2503 ntBASIC22.71■■□□□ 1.23
CHGBP05060 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 AC036111.1-201ENST00000533973 1582 ntBASIC22.71■■□□□ 1.23
CHGBP05060 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.71■■□□□ 1.23
CHGBP05060 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.71■■□□□ 1.23
CHGBP05060 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHGBP05060 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHGBP05060 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
CHGBP05060 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CHGBP05060 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CHGBP05060 HMGA1P5-201ENST00000412453 271 ntBASIC22.7■■□□□ 1.22
CHGBP05060 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.7■■□□□ 1.22
CHGBP05060 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
CHGBP05060 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CHGBP05060 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CHGBP05060 KRT8P32-201ENST00000512863 1461 ntBASIC22.7■■□□□ 1.22
CHGBP05060 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.7■■□□□ 1.22
CHGBP05060 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.7■■□□□ 1.22
CHGBP05060 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.7■■□□□ 1.22
CHGBP05060 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.7■■□□□ 1.22
CHGBP05060 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.7■■□□□ 1.22
CHGBP05060 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CHGBP05060 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHGBP05060 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CHGBP05060 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CHGBP05060 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CHGBP05060 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
CHGBP05060 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.69■■□□□ 1.22
CHGBP05060 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.69■■□□□ 1.22
CHGBP05060 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.69■■□□□ 1.22
CHGBP05060 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHGBP05060 TMPOP1-202ENST00000424642 1267 ntBASIC22.69■■□□□ 1.22
CHGBP05060 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.69■■□□□ 1.22
CHGBP05060 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHGBP05060 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.69■■□□□ 1.22
CHGBP05060 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHGBP05060 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
CHGBP05060 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHGBP05060 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHGBP05060 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CHGBP05060 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.68■■□□□ 1.22
CHGBP05060 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.68■■□□□ 1.22
CHGBP05060 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.68■■□□□ 1.22
CHGBP05060 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.68■■□□□ 1.22
CHGBP05060 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHGBP05060 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CHGBP05060 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHGBP05060 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.68■■□□□ 1.22
CHGBP05060 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.68■■□□□ 1.22
CHGBP05060 MTMR9LP-203ENST00000426597 1545 ntBASIC22.67■■□□□ 1.22
CHGBP05060 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.67■■□□□ 1.22
CHGBP05060 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CHGBP05060 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.67■■□□□ 1.22
CHGBP05060 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHGBP05060 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHGBP05060 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.67■■□□□ 1.22
CHGBP05060 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.67■■□□□ 1.22
CHGBP05060 AC068587.9-201ENST00000641814 219 ntBASIC22.67■■□□□ 1.22
CHGBP05060 AC092865.7-201ENST00000641832 219 ntBASIC22.67■■□□□ 1.22
CHGBP05060 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CHGBP05060 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHGBP05060 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.67■■□□□ 1.22
CHGBP05060 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms