Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
CLSTN1O94985 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 Z82202.1-201ENST00000623446 1880 ntBASIC20.9■□□□□ 0.94
CLSTN1O94985 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLSTN1O94985 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLSTN1O94985 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLSTN1O94985 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CLSTN1O94985 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CLSTN1O94985 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.89■□□□□ 0.94
CLSTN1O94985 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLSTN1O94985 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CLSTN1O94985 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLSTN1O94985 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLSTN1O94985 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CLSTN1O94985 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLSTN1O94985 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.89■□□□□ 0.93
CLSTN1O94985 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.89■□□□□ 0.93
CLSTN1O94985 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.89■□□□□ 0.93
CLSTN1O94985 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLSTN1O94985 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.89■□□□□ 0.93
CLSTN1O94985 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLSTN1O94985 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.89■□□□□ 0.93
CLSTN1O94985 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CLSTN1O94985 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 AL135905.2-201ENST00000584934 1404 ntBASIC20.88■□□□□ 0.93
CLSTN1O94985 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLSTN1O94985 AC093484.2-201ENST00000580996 2166 ntBASIC20.88■□□□□ 0.93
CLSTN1O94985 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 MIR718-201ENST00000390190 70 ntBASIC20.88■□□□□ 0.93
CLSTN1O94985 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CLSTN1O94985 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.88■□□□□ 0.93
CLSTN1O94985 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.88■□□□□ 0.93
CLSTN1O94985 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.88■□□□□ 0.93
CLSTN1O94985 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.88■□□□□ 0.93
CLSTN1O94985 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.88■□□□□ 0.93
CLSTN1O94985 CR392000.1-201ENST00000624770 1228 ntBASIC20.88■□□□□ 0.93
CLSTN1O94985 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLSTN1O94985 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLSTN1O94985 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLSTN1O94985 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLSTN1O94985 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CLSTN1O94985 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.87■□□□□ 0.93
CLSTN1O94985 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.87■□□□□ 0.93
CLSTN1O94985 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.87■□□□□ 0.93
CLSTN1O94985 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.87■□□□□ 0.93
CLSTN1O94985 AC008550.1-201ENST00000511500 884 ntBASIC20.87■□□□□ 0.93
CLSTN1O94985 AC093827.2-201ENST00000512654 315 ntBASIC20.87■□□□□ 0.93
CLSTN1O94985 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.87■□□□□ 0.93
CLSTN1O94985 RARRES2P10-201ENST00000564312 460 ntBASIC20.87■□□□□ 0.93
CLSTN1O94985 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.87■□□□□ 0.93
CLSTN1O94985 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.87■□□□□ 0.93
CLSTN1O94985 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLSTN1O94985 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms