Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 KRT18P6-201ENST00000555540 1265 ntBASIC18.73■□□□□ 0.59
SUPT3HO75486 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SUPT3HO75486 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
SUPT3HO75486 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.72■□□□□ 0.59
SUPT3HO75486 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.72■□□□□ 0.59
SUPT3HO75486 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.72■□□□□ 0.59
SUPT3HO75486 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.72■□□□□ 0.59
SUPT3HO75486 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SUPT3HO75486 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SUPT3HO75486 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SUPT3HO75486 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.72■□□□□ 0.59
SUPT3HO75486 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.71■□□□□ 0.59
SUPT3HO75486 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SUPT3HO75486 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.71■□□□□ 0.59
SUPT3HO75486 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.71■□□□□ 0.59
SUPT3HO75486 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.71■□□□□ 0.59
SUPT3HO75486 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.71■□□□□ 0.59
SUPT3HO75486 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 NOC2LP1-202ENST00000452600 2235 ntBASIC18.71■□□□□ 0.59
SUPT3HO75486 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SUPT3HO75486 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.71■□□□□ 0.59
SUPT3HO75486 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SUPT3HO75486 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUPT3HO75486 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.71■□□□□ 0.59
SUPT3HO75486 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SUPT3HO75486 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SUPT3HO75486 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.7■□□□□ 0.58
SUPT3HO75486 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.7■□□□□ 0.58
SUPT3HO75486 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 ESRRAP1-201ENST00000400596 1257 ntBASIC18.7■□□□□ 0.58
SUPT3HO75486 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 TSPY21P-201ENST00000433481 731 ntBASIC18.7■□□□□ 0.58
SUPT3HO75486 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.7■□□□□ 0.58
SUPT3HO75486 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.7■□□□□ 0.58
SUPT3HO75486 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
SUPT3HO75486 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUPT3HO75486 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SUPT3HO75486 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.69■□□□□ 0.58
SUPT3HO75486 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUPT3HO75486 AC007613.1-201ENST00000572811 2597 ntBASIC18.69■□□□□ 0.58
SUPT3HO75486 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms