Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EBF1Q9UH73 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EBF1Q9UH73 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EBF1Q9UH73 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EBF1Q9UH73 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EBF1Q9UH73 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.27■□□□□ 0.67
EBF1Q9UH73 AC026471.1-201ENST00000564629 3026 ntBASIC19.27■□□□□ 0.67
EBF1Q9UH73 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EBF1Q9UH73 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 ATP5G2P1-201ENST00000433580 426 ntBASIC19.26■□□□□ 0.67
EBF1Q9UH73 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 GCSHP2-201ENST00000560971 527 ntBASIC19.26■□□□□ 0.67
EBF1Q9UH73 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 AL691432.3-201ENST00000621860 400 ntBASIC19.26■□□□□ 0.67
EBF1Q9UH73 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EBF1Q9UH73 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EBF1Q9UH73 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 LINC01311-201ENST00000565162 1445 ntBASIC19.25■□□□□ 0.67
EBF1Q9UH73 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EBF1Q9UH73 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
EBF1Q9UH73 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.24■□□□□ 0.67
EBF1Q9UH73 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.24■□□□□ 0.67
EBF1Q9UH73 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EBF1Q9UH73 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms