Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 MESTP1-201ENST00000404287 994 ntBASIC19.15■□□□□ 0.66
HACD3Q9P035 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.15■□□□□ 0.66
HACD3Q9P035 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.15■□□□□ 0.66
HACD3Q9P035 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.15■□□□□ 0.66
HACD3Q9P035 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.15■□□□□ 0.66
HACD3Q9P035 MIR4785-201ENST00000585005 73 ntBASIC19.15■□□□□ 0.66
HACD3Q9P035 AP000692.2-201ENST00000608391 879 ntBASIC19.15■□□□□ 0.66
HACD3Q9P035 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 KRT8P11-201ENST00000409686 1436 ntBASIC19.15■□□□□ 0.66
HACD3Q9P035 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HACD3Q9P035 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.14■□□□□ 0.66
HACD3Q9P035 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HACD3Q9P035 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
HACD3Q9P035 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
HACD3Q9P035 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.14■□□□□ 0.66
HACD3Q9P035 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.14■□□□□ 0.66
HACD3Q9P035 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.14■□□□□ 0.65
HACD3Q9P035 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.14■□□□□ 0.65
HACD3Q9P035 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.14■□□□□ 0.65
HACD3Q9P035 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.14■□□□□ 0.65
HACD3Q9P035 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
HACD3Q9P035 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.14■□□□□ 0.65
HACD3Q9P035 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.14■□□□□ 0.65
HACD3Q9P035 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HACD3Q9P035 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HACD3Q9P035 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HACD3Q9P035 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
HACD3Q9P035 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.13■□□□□ 0.65
HACD3Q9P035 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.13■□□□□ 0.65
HACD3Q9P035 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 KRT17P2-201ENST00000300992 1314 ntBASIC19.13■□□□□ 0.65
HACD3Q9P035 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HACD3Q9P035 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HACD3Q9P035 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HACD3Q9P035 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
HACD3Q9P035 AL161938.1-201ENST00000569833 2180 ntBASIC19.12■□□□□ 0.65
HACD3Q9P035 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.12■□□□□ 0.65
HACD3Q9P035 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.12■□□□□ 0.65
HACD3Q9P035 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
HACD3Q9P035 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.12■□□□□ 0.65
HACD3Q9P035 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HACD3Q9P035 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 AC008040.2-201ENST00000461049 708 ntBASIC19.12■□□□□ 0.65
HACD3Q9P035 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
HACD3Q9P035 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.12■□□□□ 0.65
HACD3Q9P035 AP003071.4-201ENST00000562276 1284 ntBASIC19.12■□□□□ 0.65
HACD3Q9P035 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.12■□□□□ 0.65
HACD3Q9P035 REXO1L10P-201ENST00000615707 1290 ntBASIC19.12■□□□□ 0.65
HACD3Q9P035 REXO1L12P-201ENST00000622156 912 ntBASIC19.12■□□□□ 0.65
HACD3Q9P035 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.12■□□□□ 0.65
HACD3Q9P035 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HACD3Q9P035 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms