Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN22Q8N7P3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AP003097.1-201ENST00000530657 1135 ntBASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN22Q8N7P3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN22Q8N7P3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN22Q8N7P3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms