Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 TMEM191A-211ENST00000637163 1067 ntBASIC19.13■□□□□ 0.65
PACS1Q6VY07 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 AC090164.3-201ENST00000610780 2143 ntBASIC19.13■□□□□ 0.65
PACS1Q6VY07 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 UBE2SP1-201ENST00000450587 669 ntBASIC19.12■□□□□ 0.65
PACS1Q6VY07 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 AL445675.2-201ENST00000620291 557 ntBASIC19.12■□□□□ 0.65
PACS1Q6VY07 AC007613.1-201ENST00000572811 2597 ntBASIC19.12■□□□□ 0.65
PACS1Q6VY07 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS1Q6VY07 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PACS1Q6VY07 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 AC005082.1-201ENST00000413042 2259 ntBASIC19.11■□□□□ 0.65
PACS1Q6VY07 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 AL158047.1-201ENST00000445918 881 ntBASIC19.11■□□□□ 0.65
PACS1Q6VY07 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PACS1Q6VY07 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS1Q6VY07 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 AL135905.2-201ENST00000584934 1404 ntBASIC19.1■□□□□ 0.65
PACS1Q6VY07 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 AC083906.6-201ENST00000641366 219 ntBASIC19.1■□□□□ 0.65
PACS1Q6VY07 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PACS1Q6VY07 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS1Q6VY07 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS1Q6VY07 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms