Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 AC087499.1-201ENST00000418141 1075 ntBASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 C2orf69P3-201ENST00000565542 1120 ntBASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4R3AQ6IN85 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 EGLN1P1-201ENST00000531623 762 ntBASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 NAPSB-206ENST00000562112 1266 ntBASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP4R3AQ6IN85 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.48■■□□□ 1.03
PPP4R3AQ6IN85 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 AC092338.2-201ENST00000568827 1415 ntBASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 AL353719.1-201ENST00000566847 864 ntBASIC21.47■■□□□ 1.03
PPP4R3AQ6IN85 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms