Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 AC073592.3-201ENST00000625118 1834 ntBASIC19.67■□□□□ 0.74
LRRC38Q5VT99 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC38Q5VT99 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 MTMR9LP-203ENST00000426597 1545 ntBASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 AC135050.7-201ENST00000624508 2218 ntBASIC19.66■□□□□ 0.74
LRRC38Q5VT99 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 CKBP1-201ENST00000565489 1086 ntBASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 AC011298.2-201ENST00000617989 482 ntBASIC19.66■□□□□ 0.74
LRRC38Q5VT99 CR392000.1-201ENST00000624770 1228 ntBASIC19.66■□□□□ 0.74
LRRC38Q5VT99 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC38Q5VT99 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 AC008040.2-201ENST00000461049 708 ntBASIC19.65■□□□□ 0.74
LRRC38Q5VT99 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.65■□□□□ 0.74
LRRC38Q5VT99 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC38Q5VT99 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC38Q5VT99 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC38Q5VT99 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 ITM2C-210ENST00000620962 501 ntBASIC19.64■□□□□ 0.73
LRRC38Q5VT99 AL359736.2-201ENST00000621992 437 ntBASIC19.64■□□□□ 0.73
LRRC38Q5VT99 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 BICD1-207ENST00000551848 1962 ntBASIC19.64■□□□□ 0.73
LRRC38Q5VT99 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC38Q5VT99 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms