Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 RNA5SP413-201ENST00000516373 109 ntBASIC17.02■□□□□ 0.32
HLA-DPB1P04440 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 HLA-B-256ENST00000639848 1089 ntBASIC17.02■□□□□ 0.32
HLA-DPB1P04440 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPB1P04440 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPB1P04440 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 PNMA6B-201ENST00000538162 1200 ntBASIC17.01■□□□□ 0.31
HLA-DPB1P04440 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 AC005829.2-201ENST00000571422 1056 ntBASIC17.01■□□□□ 0.31
HLA-DPB1P04440 AC060766.5-201ENST00000590539 871 ntBASIC17.01■□□□□ 0.31
HLA-DPB1P04440 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 AC116351.2-201ENST00000606540 1585 ntBASIC17.01■□□□□ 0.31
HLA-DPB1P04440 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPB1P04440 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPB1P04440 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPB1P04440 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DPB1P04440 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DPB1P04440 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DPB1P04440 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DPB1P04440 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DPB1P04440 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DPB1P04440 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HLA-DPB1P04440 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DPB1P04440 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DPB1P04440 ABALON-201ENST00000629058 1903 ntBASIC17■□□□□ 0.31
HLA-DPB1P04440 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HLA-DPB1P04440 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DPB1P04440 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms