Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 KRT8P3-201ENST00000519669 1449 ntBASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.23■□□□□ 0.67
TBC1D3BA6NDS4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 MIR3180-5-201ENST00000583743 153 ntBASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3BA6NDS4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 TREX1-205ENST00000625293 1783 ntBASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TBC1D3BA6NDS4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 KRT18P48-201ENST00000434763 852 ntBASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 HCG4P8-203ENST00000443049 980 ntBASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TBC1D3BA6NDS4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 HBZP1-201ENST00000354915 429 ntBASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.19■□□□□ 0.66
TBC1D3BA6NDS4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms