Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC9.76□□□□□ -0.85
CDC42SE1Q9NRR8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 AC104581.4-201ENST00000623126 3052 ntBASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CDC42SE1Q9NRR8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 AC092720.2-201ENST00000602388 1665 ntBASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42SE1Q9NRR8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
CDC42SE1Q9NRR8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42SE1Q9NRR8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42SE1Q9NRR8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42SE1Q9NRR8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42SE1Q9NRR8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms