Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 BID-214ENST00000617586 542 ntTSL 5 BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C12orf4Q9NQ89 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 AC010980.2-201ENST00000587099 1412 ntBASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 AC007322.1-201ENST00000426983 750 ntBASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C12orf4Q9NQ89 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C12orf4Q9NQ89 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.46■□□□□ 0.22
C12orf4Q9NQ89 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
C12orf4Q9NQ89 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.46■□□□□ 0.22
C12orf4Q9NQ89 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
C12orf4Q9NQ89 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
C12orf4Q9NQ89 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C12orf4Q9NQ89 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms