Protein–RNA interactions for Protein: Q8NBF2

NHLRC2, NHL repeat-containing protein 2, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2Q8NBF2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
NHLRC2Q8NBF2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NHLRC2Q8NBF2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NHLRC2Q8NBF2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 AC093525.10-201ENST00000625130 1569 ntBASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.63□□□□□ -0.07
NHLRC2Q8NBF2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 AL591742.1-201ENST00000604433 565 ntBASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 AC016405.3-201ENST00000607710 860 ntBASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC2Q8NBF2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC2Q8NBF2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms