Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TBL1XR1-212ENST00000443315 580 ntTSL 45.27□□□□□ -1.571e-6■■□□□ 11.9
SRSF1Q07955 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.651e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-216ENST00000491623 582 ntTSL 54.36□□□□□ -1.711e-6■■□□□ 11.9
SRSF1Q07955 ALG13-234ENST00000624161 3761 ntTSL 23.98□□□□□ -1.771e-6■■□□□ 11.9
SRSF1Q07955 ALG13-239ENST00000636363 3480 ntTSL 53.95□□□□□ -1.781e-6■■□□□ 11.9
SRSF1Q07955 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.91□□□□□ -1.781e-6■■□□□ 11.9
SRSF1Q07955 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.84□□□□□ -1.791e-6■■□□□ 11.9
SRSF1Q07955 ALG13-235ENST00000624881 876 ntTSL 53.78□□□□□ -1.81e-6■■□□□ 11.9
SRSF1Q07955 ALG13-231ENST00000623255 585 ntTSL 33.77□□□□□ -1.811e-6■■□□□ 11.9
SRSF1Q07955 ALG13-209ENST00000470971 3200 ntTSL 52.92□□□□□ -1.941e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-232ENST00000637544 214 ntTSL 52.47□□□□□ -2.011e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.161e-6■■□□□ 11.9
SRSF1Q07955 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)16.09■□□□□ 0.174e-6■■□□□ 11.9
SRSF1Q07955 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)10.23□□□□□ -0.774e-6■■□□□ 11.9
SRSF1Q07955 ATG16L2-208ENST00000537143 519 ntTSL 221.95■■□□□ 1.12e-8■■□□□ 11.9
SRSF1Q07955 ATG16L2-219ENST00000542908 1178 ntTSL 221.95■■□□□ 1.12e-8■■□□□ 11.9
SRSF1Q07955 MXD3-205ENST00000503473 2279 ntTSL 520.02■□□□□ 0.82e-8■■□□□ 11.9
SRSF1Q07955 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.782e-8■■□□□ 11.9
SRSF1Q07955 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.54■□□□□ 0.722e-8■■□□□ 11.9
SRSF1Q07955 RAB24-207ENST00000495458 1608 ntTSL 218.34■□□□□ 0.532e-8■■□□□ 11.9
SRSF1Q07955 RAB24-206ENST00000478234 1820 ntTSL 217.59■□□□□ 0.412e-8■■□□□ 11.9
SRSF1Q07955 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.322e-8■■□□□ 11.9
SRSF1Q07955 RAB24-205ENST00000471466 1642 ntTSL 516.85■□□□□ 0.292e-8■■□□□ 11.9
SRSF1Q07955 ATG16L2-209ENST00000537212 821 ntTSL 316.65■□□□□ 0.262e-8■■□□□ 11.9
SRSF1Q07955 ATG16L2-217ENST00000541999 537 ntTSL 316.65■□□□□ 0.262e-8■■□□□ 11.9
SRSF1Q07955 STK25-208ENST00000423004 773 ntTSL 216.38■□□□□ 0.212e-8■■□□□ 11.9
SRSF1Q07955 RAB24-203ENST00000393610 870 ntTSL 516.35■□□□□ 0.212e-8■■□□□ 11.9
SRSF1Q07955 STK25-226ENST00000479442 511 ntTSL 214.85□□□□□ -0.032e-8■■□□□ 11.9
SRSF1Q07955 ATG16L2-221ENST00000545248 552 ntTSL 412.44□□□□□ -0.422e-8■■□□□ 11.9
SRSF1Q07955 TARDBP-224ENST00000621573 992 ntTSL 37.26□□□□□ -1.252e-13■■□□□ 11.9
SRSF1Q07955 TARDBP-219ENST00000617757 434 ntTSL 36.96□□□□□ -1.32e-13■■□□□ 11.9
SRSF1Q07955 FNDC3B-207ENST00000469491 2916 ntTSL 213.53□□□□□ -0.245e-8■■□□□ 11.9
SRSF1Q07955 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.995e-8■■□□□ 11.9
SRSF1Q07955 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.195e-8■■□□□ 11.9
SRSF1Q07955 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.255e-8■■□□□ 11.9
SRSF1Q07955 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.99■□□□□ 0.634e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-202ENST00000411704 564 ntTSL 514.96□□□□□ -0.014e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-211ENST00000468923 1096 ntTSL 214.02□□□□□ -0.174e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.79□□□□□ -0.24e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.8□□□□□ -0.364e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-210ENST00000467803 771 ntTSL 311.59□□□□□ -0.554e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.37□□□□□ -0.594e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-205ENST00000428425 2220 ntTSL 1 (best)10.88□□□□□ -0.674e-7■■□□□ 11.9
SRSF1Q07955 HNRNPU-227ENST00000640264 328 ntTSL 310.64□□□□□ -0.712e-8■■□□□ 11.9
SRSF1Q07955 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.834e-7■■□□□ 11.9
SRSF1Q07955 NCBP2-209ENST00000463783 4161 ntTSL 1 (best)6.69□□□□□ -1.344e-7■■□□□ 11.9
SRSF1Q07955 LAMTOR5-AS1-238ENST00000626572 1044 ntTSL 55.69□□□□□ -1.52e-6■■□□□ 11.9
SRSF1Q07955 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.43■□□□□ 0.064e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.064e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-215ENST00000575857 588 ntTSL 310.12□□□□□ -0.794e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC9.43□□□□□ -0.94e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC9.13□□□□□ -0.954e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC8.84□□□□□ -0.994e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC8.49□□□□□ -1.054e-7■■□□□ 11.9
SRSF1Q07955 SLC12A4-206ENST00000570802 3761 ntTSL 28.45□□□□□ -1.064e-7■■□□□ 11.9
SRSF1Q07955 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)11.14□□□□□ -0.639e-8■■□□□ 11.9
SRSF1Q07955 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC9.2□□□□□ -0.949e-8■■□□□ 11.9
SRSF1Q07955 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)9.18□□□□□ -0.949e-8■■□□□ 11.9
SRSF1Q07955 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)12.03□□□□□ -0.489e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-230ENST00000629955 1435 ntTSL 512.03□□□□□ -0.489e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-231ENST00000630572 468 ntTSL 511.71□□□□□ -0.539e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.549e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.79e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-237ENST00000636732 5073 ntTSL 510.3□□□□□ -0.769e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC9.83□□□□□ -0.849e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-207ENST00000431672 709 ntTSL 49.61□□□□□ -0.879e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-212ENST00000453352 581 ntTSL 39□□□□□ -0.979e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-209ENST00000435831 554 ntTSL 48.88□□□□□ -0.999e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC8.79□□□□□ -19e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC8.66□□□□□ -1.029e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-220ENST00000476394 601 ntTSL 38.65□□□□□ -1.029e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-222ENST00000484313 845 ntTSL 1 (best)8.33□□□□□ -1.089e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC8.16□□□□□ -1.19e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-235ENST00000636445 2947 ntTSL 58.12□□□□□ -1.119e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC7.87□□□□□ -1.159e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.29e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-208ENST00000434448 583 ntTSL 57.42□□□□□ -1.229e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-216ENST00000465308 1071 ntTSL 57.42□□□□□ -1.229e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC7.35□□□□□ -1.239e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-211ENST00000444559 577 ntTSL 47.34□□□□□ -1.239e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC7.07□□□□□ -1.289e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.289e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC6.77□□□□□ -1.339e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-203ENST00000409211 587 ntTSL 46.76□□□□□ -1.339e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.52□□□□□ -1.379e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)5.94□□□□□ -1.469e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-240ENST00000637267 2677 ntTSL 55.7□□□□□ -1.59e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-213ENST00000461784 751 ntTSL 33.58□□□□□ -1.849e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)3.44□□□□□ -1.869e-9■■□□□ 11.9
SRSF1Q07955 ZEB2-242ENST00000637591 101 ntTSL 51.89□□□□□ -2.119e-9■■□□□ 11.9
SRSF1Q07955 HSP90B1-204ENST00000548622 839 ntTSL 217.28■□□□□ 0.367e-10■■□□□ 11.9
SRSF1Q07955 YARS-207ENST00000481895 1018 ntTSL 518.8■□□□□ 0.63e-6■■□□□ 11.9
SRSF1Q07955 YARS-210ENST00000616261 1167 ntTSL 5 BASIC8.62□□□□□ -1.033e-6■■□□□ 11.9
SRSF1Q07955 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.97■□□□□ 0.312e-8■■□□□ 11.8
SRSF1Q07955 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.16■□□□□ 0.022e-8■■□□□ 11.8
SRSF1Q07955 EEF1E1-204ENST00000502429 591 ntTSL 38.34□□□□□ -1.072e-8■■□□□ 11.8
SRSF1Q07955 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.752e-8■■□□□ 11.8
SRSF1Q07955 KPNB1-212ENST00000582126 653 ntTSL 512.31□□□□□ -0.444e-6■■□□□ 11.8
SRSF1Q07955 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.051e-6■■□□□ 11.8
SRSF1Q07955 KPNB1-209ENST00000580158 603 ntTSL 26.73□□□□□ -1.334e-6■■□□□ 11.8
Retrieved 100 of 14,836 protein–RNA pairs in 90.2 ms