RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 AEBP2Q6ZN18 517 aaPredicted RBP30.66■■■□□ 2.5
TARDBP-224ENST00000621573 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
TARDBP-224ENST00000621573 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
TARDBP-224ENST00000621573 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
TARDBP-224ENST00000621573 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
TARDBP-224ENST00000621573 FOXD1Q16676 465 aa24.12■■□□□ 1.45
TARDBP-224ENST00000621573 PPP6R1Q9UPN7 881 aa23.29■■□□□ 1.32
TARDBP-224ENST00000621573 ADRA2BP18089 450 aa23.26■■□□□ 1.31
TARDBP-224ENST00000621573 PIAS4Q8N2W9 510 aaPredicted RBP22.74■■□□□ 1.23
TARDBP-224ENST00000621573 MSH5O43196 834 aa22.17■■□□□ 1.14
TARDBP-224ENST00000621573 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
TARDBP-224ENST00000621573 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
TARDBP-224ENST00000621573 KCNA4P22459 653 aa21.12■□□□□ 0.97
TARDBP-224ENST00000621573 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
TARDBP-224ENST00000621573 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
TARDBP-224ENST00000621573 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
TARDBP-224ENST00000621573 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
TARDBP-224ENST00000621573 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
TARDBP-224ENST00000621573 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
TARDBP-224ENST00000621573 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
TARDBP-224ENST00000621573 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
TARDBP-224ENST00000621573 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
TARDBP-224ENST00000621573 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
TARDBP-224ENST00000621573 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
TARDBP-224ENST00000621573 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
TARDBP-224ENST00000621573 SLC4A2P04920 1241 aa19.51■□□□□ 0.71
TARDBP-224ENST00000621573 ZBTB22O15209 634 aa19.46■□□□□ 0.71
TARDBP-224ENST00000621573 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
TARDBP-224ENST00000621573 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.69
TARDBP-224ENST00000621573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
TARDBP-224ENST00000621573 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
TARDBP-224ENST00000621573 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
TARDBP-224ENST00000621573 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
TARDBP-224ENST00000621573 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
TARDBP-224ENST00000621573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
TARDBP-224ENST00000621573 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
TARDBP-224ENST00000621573 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
TARDBP-224ENST00000621573 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
TARDBP-224ENST00000621573 ATXN8OSP0DMR3 200 aa18.7■□□□□ 0.58
TARDBP-224ENST00000621573 APLP2Q06481 763 aa18.61■□□□□ 0.57
TARDBP-224ENST00000621573 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
TARDBP-224ENST00000621573 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
TARDBP-224ENST00000621573 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
TARDBP-224ENST00000621573 CAPN15O75808 1086 aa18.45■□□□□ 0.54
TARDBP-224ENST00000621573 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-224ENST00000621573 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
TARDBP-224ENST00000621573 DSG3P32926 999 aa18.14■□□□□ 0.49
TARDBP-224ENST00000621573 ABCB7O75027 752 aa18.12■□□□□ 0.49
TARDBP-224ENST00000621573 POLA2Q14181 598 aa18.12■□□□□ 0.49
TARDBP-224ENST00000621573 MKRN4PQ13434 485 aaPredicted RBP17.8■□□□□ 0.44
TARDBP-224ENST00000621573 ZBTB12Q9Y330 459 aaPredicted RBP17.78■□□□□ 0.44
TARDBP-224ENST00000621573 FBLN2P98095 1184 aa17.76■□□□□ 0.43
TARDBP-224ENST00000621573 FKBP8Q14318 412 aa17.51■□□□□ 0.39
TARDBP-224ENST00000621573 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
TARDBP-224ENST00000621573 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
TARDBP-224ENST00000621573 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
TARDBP-224ENST00000621573 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
TARDBP-224ENST00000621573 SPDYE2Q495Y8 402 aa17.33■□□□□ 0.36
TARDBP-224ENST00000621573 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-224ENST00000621573 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
TARDBP-224ENST00000621573 SSUH2Q9Y2M2 353 aa17.22■□□□□ 0.35
TARDBP-224ENST00000621573 PROM2Q8N271 834 aa17.15■□□□□ 0.34
TARDBP-224ENST00000621573 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
TARDBP-224ENST00000621573 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
TARDBP-224ENST00000621573 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-224ENST00000621573 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
TARDBP-224ENST00000621573 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
TARDBP-224ENST00000621573 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
TARDBP-224ENST00000621573 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
TARDBP-224ENST00000621573 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
TARDBP-224ENST00000621573 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
TARDBP-224ENST00000621573 VASPP50552 380 aaPredicted RBP16.63■□□□□ 0.25
TARDBP-224ENST00000621573 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
TARDBP-224ENST00000621573 ABCC9O60706 1549 aa16.57■□□□□ 0.24
TARDBP-224ENST00000621573 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
TARDBP-224ENST00000621573 MIER1Q8N108 512 aa16.49■□□□□ 0.23
TARDBP-224ENST00000621573 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
TARDBP-224ENST00000621573 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
TARDBP-224ENST00000621573 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
TARDBP-224ENST00000621573 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
TARDBP-224ENST00000621573 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
TARDBP-224ENST00000621573 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
TARDBP-224ENST00000621573 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
TARDBP-224ENST00000621573 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
TARDBP-224ENST00000621573 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
TARDBP-224ENST00000621573 POTEHQ6S545 545 aa16.29■□□□□ 0.2
TARDBP-224ENST00000621573 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
TARDBP-224ENST00000621573 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-224ENST00000621573 SPOCK2Q92563 424 aa16.19■□□□□ 0.18
TARDBP-224ENST00000621573 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-224ENST00000621573 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
TARDBP-224ENST00000621573 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
TARDBP-224ENST00000621573 NUBP1P53384 320 aa16.09■□□□□ 0.17
TARDBP-224ENST00000621573 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-224ENST00000621573 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
TARDBP-224ENST00000621573 RASEFQ8IZ41 740 aa16■□□□□ 0.15
TARDBP-224ENST00000621573 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
TARDBP-224ENST00000621573 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
TARDBP-224ENST00000621573 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
TARDBP-224ENST00000621573 PKD2Q13563 968 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms