Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCR4P61073 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCR4P61073 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCR4P61073 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCR4P61073 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CXCR4P61073 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCR4P61073 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCR4P61073 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCR4P61073 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCR4P61073 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCR4P61073 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CXCR4P61073 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCR4P61073 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CXCR4P61073 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CXCR4P61073 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CXCR4P61073 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
CXCR4P61073 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 AL512625.2-201ENST00000417533 625 ntBASIC17.28■□□□□ 0.36
CXCR4P61073 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.28■□□□□ 0.36
CXCR4P61073 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCR4P61073 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.28■□□□□ 0.36
CXCR4P61073 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.28■□□□□ 0.36
CXCR4P61073 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCR4P61073 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.28■□□□□ 0.36
CXCR4P61073 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.27■□□□□ 0.36
CXCR4P61073 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CXCR4P61073 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CXCR4P61073 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.27■□□□□ 0.36
CXCR4P61073 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.27■□□□□ 0.36
CXCR4P61073 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.27■□□□□ 0.36
CXCR4P61073 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.27■□□□□ 0.36
CXCR4P61073 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CXCR4P61073 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.27■□□□□ 0.35
CXCR4P61073 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CXCR4P61073 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.35
CXCR4P61073 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR4P61073 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.27■□□□□ 0.35
CXCR4P61073 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms