Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN12P56749 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN12P56749 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN12P56749 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN12P56749 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.5■□□□□ 0.23
CLDN12P56749 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN12P56749 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN12P56749 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN12P56749 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN12P56749 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 AC126763.1-201ENST00000552015 2118 ntBASIC16.49■□□□□ 0.23
CLDN12P56749 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN12P56749 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN12P56749 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN12P56749 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN12P56749 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN12P56749 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 AC231657.2-201ENST00000624556 255 ntBASIC16.49■□□□□ 0.23
CLDN12P56749 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN12P56749 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN12P56749 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN12P56749 KRT8P8-201ENST00000434750 1448 ntBASIC16.48■□□□□ 0.23
CLDN12P56749 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 AL390719.1-204ENST00000412397 1219 ntBASIC16.48■□□□□ 0.23
CLDN12P56749 KRT18P5-201ENST00000436075 1291 ntBASIC16.48■□□□□ 0.23
CLDN12P56749 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.48■□□□□ 0.23
CLDN12P56749 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN12P56749 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN12P56749 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN12P56749 AC005181.1-201ENST00000604782 1256 ntBASIC16.48■□□□□ 0.23
CLDN12P56749 AC087623.3-201ENST00000607047 1098 ntBASIC16.48■□□□□ 0.23
CLDN12P56749 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN12P56749 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN12P56749 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN12P56749 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLDN12P56749 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN12P56749 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN12P56749 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN12P56749 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN12P56749 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN12P56749 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN12P56749 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN12P56749 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN12P56749 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN12P56749 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms