Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 AC105020.6-201ENST00000621523 1217 ntBASIC15.18■□□□□ 0.02
ATP6V0CP27449 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATP6V0CP27449 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP6V0CP27449 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 PCDHA12-202ENST00000613593 2588 ntBASIC15.17■□□□□ 0.02
ATP6V0CP27449 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP6V0CP27449 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP6V0CP27449 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 MCRIP2P1-201ENST00000394346 511 ntBASIC15.16■□□□□ 0.02
ATP6V0CP27449 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATP6V0CP27449 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.16■□□□□ 0.02
ATP6V0CP27449 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP6V0CP27449 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP6V0CP27449 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP6V0CP27449 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP6V0CP27449 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP6V0CP27449 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms