Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL1P22362 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL1P22362 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 KRT8P3-201ENST00000519669 1449 ntBASIC16.34■□□□□ 0.21
CCL1P22362 KRT8P32-201ENST00000512863 1461 ntBASIC16.34■□□□□ 0.21
CCL1P22362 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 MTMR9LP-203ENST00000426597 1545 ntBASIC16.34■□□□□ 0.21
CCL1P22362 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL1P22362 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL1P22362 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL1P22362 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL1P22362 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.33■□□□□ 0.21
CCL1P22362 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCL1P22362 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.33■□□□□ 0.21
CCL1P22362 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCL1P22362 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL1P22362 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.33■□□□□ 0.21
CCL1P22362 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL1P22362 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL1P22362 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.33■□□□□ 0.2
CCL1P22362 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL1P22362 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL1P22362 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL1P22362 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL1P22362 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL1P22362 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCL1P22362 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCL1P22362 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.32■□□□□ 0.2
CCL1P22362 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CCL1P22362 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL1P22362 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL1P22362 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.32■□□□□ 0.2
CCL1P22362 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL1P22362 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL1P22362 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCL1P22362 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL1P22362 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCL1P22362 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms