Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPB1P04440 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AC068880.1-201ENST00000507289 2297 ntBASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AP000997.3-201ENST00000623333 2250 ntBASIC17.05■□□□□ 0.32
HLA-DPB1P04440 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 AC092368.3-202ENST00000574180 1591 ntBASIC17.05■□□□□ 0.32
HLA-DPB1P04440 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DPB1P04440 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 AC006557.6-201ENST00000623071 864 ntBASIC17.04■□□□□ 0.32
HLA-DPB1P04440 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 AC018553.1-201ENST00000616682 1458 ntBASIC17.04■□□□□ 0.32
HLA-DPB1P04440 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPB1P04440 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 AL390719.1-204ENST00000412397 1219 ntBASIC17.03■□□□□ 0.32
HLA-DPB1P04440 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPB1P04440 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms